Staphylococcus xylosus SMQ-121: SXYLSMQ121_2117
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Entry
SXYLSMQ121_2117 CDS
T03311
Name
(GenBank) Uracil-DNA glycosylase, family 1
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
sxl
Staphylococcus xylosus SMQ-121
Pathway
sxl03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sxl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
SXYLSMQ121_2117
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sxl03400
]
SXYLSMQ121_2117
Enzymes [BR:
sxl01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
SXYLSMQ121_2117
DNA repair and recombination proteins [BR:
sxl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
SXYLSMQ121_2117
Prokaryotic type
SXYLSMQ121_2117
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
AID43548
LinkDB
All DBs
Position
complement(2274570..2275226)
Genome browser
AA seq
218 aa
AA seq
DB search
MEWSDVFHDITTRHDFTAMHDFLEKEYTTEVVYPDKENIYQAFDLTPFEQVKVVILGQDP
YHGPNQAHGLAFSVQPDAKFPPSLRNMYKELEDDIGCVRQSPHLQDWAREGVLLLNTVLT
VRQGEAHSHKNVGWEVFTDEVIKAVSEQLKNVVFILWGKPAQQKIKLIDTTKHHIIQSPH
PSPLSAYRGFFGSKPYSLTNKYLQANGIQPVNWCESED
NT seq
657 nt
NT seq
+upstream
nt +downstream
nt
atggaatggtcggatgtttttcatgatataactacgcgacatgactttactgctatgcat
gattttttagaaaaagaatatactactgaagtggtgtatccagataaggaaaatatttat
caggcgtttgatttaactccttttgaacaagtgaaagtggttatattaggccaagatcct
tatcatggaccgaatcaagcacatggattagccttttcagtacaaccagatgctaagttt
cctccttctttgcgaaatatgtataaagaacttgaagatgatatcggttgtgtaagacaa
tctccacatttacaggattgggcgcgtgagggtgtcttattgttaaatactgttttgacg
gttcgccaaggggaagcgcattctcataaaaatgttggttgggaagtctttaccgatgaa
gtgataaaagcggtatctgaacaattgaaaaatgtcgtgtttattttatgggggaaaccc
gcgcaacagaaaattaagctgatagacactacgaaacaccatattattcagtctccacat
ccgagtccgttgtcagcatatcgtgggttctttggatcaaaaccgtattctctgacaaat
aaatatttacaagcaaatggcattcaaccagtgaattggtgtgagagtgaggattaa
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