Shewanella xiamenensis: MKD32_00070
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Entry
MKD32_00070 CDS
T08228
Symbol
fadB
Name
(GenBank) fatty acid oxidation complex subunit alpha FadB
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
sxm
Shewanella xiamenensis
Pathway
sxm00071
Fatty acid degradation
sxm00280
Valine, leucine and isoleucine degradation
sxm00310
Lysine degradation
sxm00362
Benzoate degradation
sxm00380
Tryptophan metabolism
sxm00410
beta-Alanine metabolism
sxm00640
Propanoate metabolism
sxm00650
Butanoate metabolism
sxm00907
Pinene, camphor and geraniol degradation
sxm00930
Caprolactam degradation
sxm01100
Metabolic pathways
sxm01110
Biosynthesis of secondary metabolites
sxm01120
Microbial metabolism in diverse environments
sxm01200
Carbon metabolism
sxm01212
Fatty acid metabolism
Module
sxm_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
sxm00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
MKD32_00070 (fadB)
00650 Butanoate metabolism
MKD32_00070 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
MKD32_00070 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
MKD32_00070 (fadB)
00310 Lysine degradation
MKD32_00070 (fadB)
00380 Tryptophan metabolism
MKD32_00070 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
MKD32_00070 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
MKD32_00070 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
MKD32_00070 (fadB)
00930 Caprolactam degradation
MKD32_00070 (fadB)
Enzymes [BR:
sxm01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
MKD32_00070 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
MKD32_00070 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
MKD32_00070 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
MKD32_00070 (fadB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
NAD_binding_2
Motif
Other DBs
NCBI-ProteinID:
UML93789
LinkDB
All DBs
Position
complement(17136..19286)
Genome browser
AA seq
716 aa
AA seq
DB search
MIYQSPTIQVELLEDNIAKLCFNAPGSVNKFDRETLASLDAALDSIKQQSNIQALVLTSG
KDTFIVGADITEFLGLFAQDDAVLLSWVEQANAVFNKLEDLPFPTASAIKGFALGGGCET
ILSTDFRIADTTAKIGLPETKLGIIPGFGGTVRLPRVIGADNALEWITTGKDQSGEDALK
VGAVDAVVAPEALEAAAIQMLKDAVAEKLDWQARRQRKLSPLTLPKLEAMMSFTTAKGMV
FSVAGKHYPAPMAAVNVVEQASTKGRAEALQIEHQAFIKLAKTDVAKALIGIFLNDQFVK
GKAKKAGKLAKDVKSAAVLGAGIMGGGIAYQSASKGTPIVMKDIAQPALDLGLGEAAKLL
SAQVARGRSTPEKMAKVLNNITPALDYAPVKHADVVVEAVVEHPKVKAQVLAEVEQYVSE
DAIIASNTSTISINLLAKSMKKPERFCGMHFFNPVHKMPLVEVIRGEHSSEETIASVVAY
ASKMGKTPIVVNDCPGFFVNRVLFPYFAGFNGLLAEGGDFAAIDKVMEKQFGWPMGPAYL
LDVVGLDTGHHAQAVMAEGFPDRMGKSGNDAIDVMFENKRLGQKNGKGFYAYSVDSRGKP
KKDVDPTSYELLKAAFGEQKAFDADEIIARTMIPMIIETVRCLEEGIVASPAEADMGLVY
GLGFPPFRGGVFRYLDTMGVANFVALADKYAHLGGLYQVTDAMRALAANNGSYYQA
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
atgatctaccaaagtcctacaattcaggttgagttactcgaggataatattgccaagctg
tgctttaacgcacccggttcggtgaacaaattcgacagagaaacactcgcctcactcgat
gccgcattagatagcattaaacaacaatcaaacattcaggctttagtgctgacctcaggt
aaagatacctttatcgtgggtgccgacattactgaatttttaggcttattcgcacaggat
gatgcggtactgctctcttgggttgaacaggccaatgccgtattcaataaacttgaagat
ttacctttcccaaccgcttctgcaattaaaggttttgccctaggcggcggttgtgaaacc
attctgtcaacggatttccgtattgctgacaccacagccaaaatcggtctacccgaaacc
aagctaggcatcatcccaggctttggtggaacagtgcgcttaccacgtgtgattggtgct
gacaacgcccttgagtggatcaccacgggtaaagaccaaagcggcgaagatgcattaaaa
gtcggcgctgttgacgccgttgtcgctccagaagccttagaagctgcggcgattcaaatg
ctaaaagatgcagtagcagaaaagcttgattggcaagcgcgtcgccaacgcaaattatcg
ccactgacactgcctaaactcgaagccatgatgtctttcacgaccgctaaaggcatggtt
ttctctgtcgcaggcaaacattacccagcaccaatggcagcggtaaacgtagttgaacaa
gcgtcgaccaaaggccgcgccgaagcactacaaattgaacatcaagctttcatcaagtta
gcgaaaaccgatgtagccaaagcactaatcggtatcttccttaatgatcaattcgttaaa
ggcaaagcgaagaaagcgggcaagctcgctaaagatgtgaaaagcgcagccgtattaggt
gcaggcattatggggggcggtatcgcttaccaaagcgccagcaaaggcacgccaatcgtg
atgaaggacatcgctcaacctgcattagatttaggtttaggcgaagccgctaaactgtta
tctgcgcaagttgctcgcggccgctctaccccagaaaaaatggctaaagtgctgaacaac
atcaccccagcattagactatgccccagtgaaacatgctgacgtggttgtcgaagccgtc
gttgagcatcccaaagttaaggcacaagtactggcggaagttgaacaatacgtcagtgaa
gatgcgattatcgcctctaacacttcaactatttcaatcaacctgctcgcgaagagcatg
aagaagccagagcgcttctgtggtatgcacttcttcaaccctgtgcacaaaatgccatta
gttgaagttatccgtggcgagcacagctcagaagaaaccatcgcatcagttgttgcctac
gccagcaaaatgggtaaaaccccaatcgttgttaacgattgcccgggcttcttcgttaac
cgcgttctcttcccttactttgctggctttaacggcctgctcgccgaaggtggcgacttt
gccgctatcgacaaagtgatggaaaaacaattcggctggccaatgggccctgcttatctg
ctagacgttgtcggtttagacacaggccaccacgcccaagcagtaatggccgaaggcttc
cccgatcgtatgggcaaatccggcaatgacgcgattgacgtgatgttcgaaaacaaacgt
ctcggtcagaagaatggcaaaggcttctacgcttactctgtggatagccgcggtaagcca
aagaaagacgtcgacccaaccagctacgagctgctgaaggccgcctttggtgaacaaaaa
gcattcgatgcggatgaaatcatcgcccgcactatgatcccaatgattatcgaaaccgtt
cgctgtttagaagaaggcattgtggcatcacctgccgaagcagatatgggcttagtctac
ggtttaggcttcccaccattccgtggtggtgtgttccgttacttagatactatgggcgta
gccaactttgtcgccttagctgacaaatacgctcacttaggtggtttgtatcaagtcacc
gacgccatgcgcgcccttgcagccaacaacggtagctactaccaagcctaa
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