Shewanella xiamenensis: MKD32_00435
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Entry
MKD32_00435 CDS
T08228
Name
(GenBank) long-chain fatty acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
sxm
Shewanella xiamenensis
Pathway
sxm00061
Fatty acid biosynthesis
sxm00071
Fatty acid degradation
sxm01100
Metabolic pathways
sxm01212
Fatty acid metabolism
sxm02024
Quorum sensing
sxm04146
Peroxisome
Module
sxm_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
sxm00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
MKD32_00435
00071 Fatty acid degradation
MKD32_00435
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
MKD32_00435
09145 Cellular community - prokaryotes
02024 Quorum sensing
MKD32_00435
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
sxm01004
]
MKD32_00435
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sxm04147
]
MKD32_00435
Enzymes [BR:
sxm01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
MKD32_00435
Lipid biosynthesis proteins [BR:
sxm01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
MKD32_00435
Exosome [BR:
sxm04147
]
Exosomal proteins
Exosomal proteins of breast milk
MKD32_00435
Exosomal proteins of breast cancer cells
MKD32_00435
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
UML93854
LinkDB
All DBs
Position
97021..98814
Genome browser
AA seq
597 aa
AA seq
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MSLEQYHVIRLLQQQSQSLKEAIALEGFEMAAPWHQVSWQAFDEISHKIAQVLIQLGVQV
QDRCVILSQNCPQWTCADIGILKSRAIVVPIYPTSTLEQASFIINDAAAKVIFVDDAKQY
ALACELQKQCPTLEHVIVFDAAVQLAQDKPQHRHLDNVLAQEYDQSAELEQRLKDANLDD
LLTLIYTSGTTGDPKGVMLDYRNMASTVRQHDQILPFNAGDVSLAFLPLSHVFERSWSFY
VLCRGGHNVYLQNTQRVKEAISAVRPHTLCVVPRFLEKVYSAVQDKVAKSAEGRKKLFAW
AMGVGERQFEVSQGRAKGGLWLSLQWRLANKLVYSKLQAVLGGRLKFMPCGGAALDLNVA
SFFHAIGIPVLCGYGMTETNATVTCNTLDNRVAGSNGKVLPEIEIKLGKDDEILVRGDTV
MRGYYNRPEDTAAAFEDGWLKTGDAGRLDAHGNLFITDRIKELMKTSNGKYIAPQRVEGA
VGCCPFIEQVAVIADARNYVTALIVPAFESLEAWAKEKGLKYESPIELLRHSHVVEHFEQ
RLKQLQQELASFEQIKKFTLLPEAFSMEAGLITPTLKLRRKMIYHKYAHEINAMYNN
NT seq
1794 nt
NT seq
+upstream
nt +downstream
nt
atgtcgctcgaacaatatcacgtaattcgactattacagcagcaaagccagtcgttaaag
gaggctattgcgctggaaggttttgaaatggcagccccttggcatcaagtcagttggcag
gcatttgatgagatcagccataaaattgcacaagtgttgattcaactcggcgtacaagtg
caagaccgctgtgtgatcctgtcacaaaactgcccacaatggacctgtgccgatatcggc
attctgaaaagccgtgccattgtcgtgcctatttacccaaccagtaccttagagcaagcc
agctttatcattaatgatgcggcggctaaggtgatttttgtcgacgacgctaagcaatat
gcgctggcctgcgagctacaaaaacagtgtccgactctagagcatgtgattgtgttcgat
gccgcagttcagttggctcaggataaacctcagcatagacatttagataacgtgctagcg
caggaatatgaccaaagtgccgagctggagcaacgcttaaaagacgcgaatcttgatgat
ctgttaaccctgatttatacctccggcaccacgggtgatcctaagggcgtcatgctggat
taccgcaatatggcttcgactgtgcgtcagcacgatcagattttgccttttaatgctggc
gatgtgtctttagctttcctaccgctaagccatgtgtttgagcgtagctggagtttctac
gttttatgccgtggtggccataatgtgtatctgcaaaatacccaaagagtaaaagaagcg
ataagtgcagtgcgtccgcataccttgtgtgtggtgccgcgtttcctcgagaaggtttac
agcgcagtacaggataaggtcgcgaaatccgcagagggtcgtaaaaaattatttgcttgg
gcgatgggggttggcgagcgtcagtttgaagtgagccaaggccgcgctaagggcggtttg
tggttatccttgcaatggcgtttggcgaataaattggtttacagcaagttgcaggcagtg
ctcggtggacggttaaagtttatgccctgtggcggtgctgcacttgatttaaatgtggcg
tcttttttccatgctattggtattcctgtgctttgtggctatggcatgaccgaaacaaac
gctactgtgacctgtaacactttggataaccgtgttgcggggtcaaacggtaaagtcttg
cccgaaatcgaaattaaactgggtaaagacgatgaaatcttagtccgtggcgataccgtg
atgcgcggttattacaatcgccctgaagatactgccgccgcctttgaagacggctggtta
aaaaccggtgatgcgggacgactcgatgcccacggcaatttgtttattaccgatcgtatt
aaagaattgatgaagacctctaacggtaaatatattgcaccgcaaagggttgagggtgct
gttgggtgttgtccttttatcgaacaagtggcggtgattgccgatgcgcgtaactatgtg
acggcgctaattgtgccagcctttgaatccctcgaagcatgggcaaaggaaaaaggctta
aagtatgagtcgcctattgagctgctgcgccatagccatgtggttgagcatttcgagcag
cgtctcaaacagctccagcaggagttggctagttttgagcaaatcaaaaagtttaccctg
ctgccggaagctttttcgatggaggcaggattaatcacgccgacgcttaagttgcgtcgc
aaaatgatttatcacaagtacgcccatgaaattaatgctatgtataataattga
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