Shewanella xiamenensis: MKD32_04080
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Entry
MKD32_04080 CDS
T08228
Symbol
kdsA
Name
(GenBank) 3-deoxy-8-phosphooctulonate synthase
KO
K01627
2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:
2.5.1.55
]
Organism
sxm
Shewanella xiamenensis
Pathway
sxm00541
Biosynthesis of various nucleotide sugars
sxm01100
Metabolic pathways
sxm01250
Biosynthesis of nucleotide sugars
Module
sxm_M00063
CMP-3-deoxy-D-manno-octulosonate biosynthesis, ribulose-5P => CMP-KDO
Brite
KEGG Orthology (KO) [BR:
sxm00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
MKD32_04080 (kdsA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
sxm01005
]
MKD32_04080 (kdsA)
Enzymes [BR:
sxm01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.55 3-deoxy-8-phosphooctulonate synthase
MKD32_04080 (kdsA)
Lipopolysaccharide biosynthesis proteins [BR:
sxm01005
]
Lipid A
MKD32_04080 (kdsA)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DAHP_synth_1
POLQ_helical
Motif
Other DBs
NCBI-ProteinID:
UML94517
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Position
914384..915232
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AA seq
282 aa
AA seq
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MSNKIIKLGSIEIANDKPFVLFGGMNVLESRDLAMSIAETYAEVTQKLGIPYVFKASFDK
ANRSSVNSYRGPGMEEGLKIFEEIKKTFNLPLITDVHEPYQCAPVAEVVDIIQLPAFLAR
QTDLVVAMAKTGAIINVKKPQFLAPHEMRHIITKFNEAGNDEIILCERGSCFGYNNLVVD
MLGMDEMKQSGYPVIFDATHALQRPGGRADSAGGRRAQATELARSGMALGLAGLFIEAHP
DPDNAKCDGPCALPLHQLENYLKQMKAMDDLVKSFEPIDTSK
NT seq
849 nt
NT seq
+upstream
nt +downstream
nt
atgagtaataaaatcataaagttaggttcaatcgaaattgcaaatgataaaccttttgtg
ctattcggtggcatgaatgtgcttgagtctcgcgatctcgcgatgtcgattgctgaaacc
tatgccgaagtgactcaaaaactggggatcccctatgttttcaaggcatcgttcgataag
gctaatcgctcttctgtcaactcttaccgtggtccaggcatggaagaaggcttaaagatt
tttgaagaaatcaaaaagaccttcaatctgccactcattaccgatgtgcatgagccttac
caatgtgcgcctgtagctgaagtggttgatattattcaattaccagctttcttagcgcgc
caaacagaccttgttgtcgcgatggcgaaaacgggcgctatcatcaacgtgaaaaagccg
cagtttttagccccccacgaaatgcgccatatcatcactaagtttaatgaagcgggtaat
gatgaaattatcctgtgtgaacgtggttcatgcttcggttacaacaacctagtagtagat
atgctgggtatggacgagatgaagcaatcgggttatccggtgattttcgacgccacccac
gcattgcaacgcccaggtggccgtgctgattcagcgggaggccgtcgtgctcaggcgact
gaattagcccgtagtggcatggcattaggcttagcaggtctgtttatcgaagctcaccca
gatccagataacgctaagtgtgatggtccatgtgcgttacctttgcaccagttagaaaat
tatctgaagcagatgaaagcgatggatgatttagtcaaatccttcgagccaattgatacc
agcaagtaa
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