Shewanella xiamenensis: MKD32_05425
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Entry
MKD32_05425 CDS
T08228
Name
(GenBank) rRNA (guanine-N1)-methyltransferase
KO
K02674
type IV pilus assembly protein PilY1
Organism
sxm
Shewanella xiamenensis
Brite
KEGG Orthology (KO) [BR:
sxm00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
sxm02044
]
MKD32_05425
02035 Bacterial motility proteins [BR:
sxm02035
]
MKD32_05425
Secretion system [BR:
sxm02044
]
Type II secretion system
Pilin secretion/fimbrial assembly protein
MKD32_05425
Bacterial motility proteins [BR:
sxm02035
]
Pilus system
Pilus assembly proteins
MKD32_05425
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
T4P_PilY1
Catalase_C
Motif
Other DBs
NCBI-ProteinID:
UML94761
LinkDB
All DBs
Position
1239284..1242955
Genome browser
AA seq
1223 aa
AA seq
DB search
MSQFLFKCQKKSLMIFSLNYVLLKHICQSRLQNVRQTLTSIVAFIISSLVVGAASLFTAS
SVADDTELYVFEASARNGSRPQVLIIFDNSGSMSNLAYGVDAPYENKRNANYAQSGKLFY
SRGSADNAELPNPASSREKRQFNAALNGCESSWDYLNRYGTFTGFFREYGFSGGTGAWKE
FSELNGGSIAAVDCFEDIQDERLGNAAGEANGLPVDSLGSAAKPVRYTAVNIHSSESAKA
SAKAKAQKTGFGSGKVVTVYTEDYLKWHHGTKKKVNKTRLELAQDAIESVVLTTPSVDFG
LAIFNMNGPRDGARDGGRIISGIKTMSAQAKIDLLKRVNLISYAQNTPLCETLYEAYRYF
GGQEQYFGDDDSDYNYYDNWGRYQGTYNASSNPFTDPAALIIGSNTYNSPFKPCQNEAYI
VYITDGEPTLDNAADGIIERLTNGVGKHTSNPKSYLSALSGWMRTEDVNPNLAGKQTVRT
FTIGFSEGAASAEHLLKQTADNGGGKYFDATDASQLRSSLQTALNNILEKNASFTSPSVA
SNNFNRTQTFDSAYYSMFLPNKGPRWLGNIKKFKVTSDGDVVDSKGKNVIGEDGNIKADA
CSYWTSAEECGSSGDGNDVKRGGVLAAMQQATSRTLYSNFGSGLSAFTLSNAARKAGDNV
RLATYMGVDETELTGLFDWAKGIDVDNDKNQDLSTASGATPNWRADIMGDALHSKPLALN
FGSEAKPDIRILVGTNHGFLHMFKDEGDSVSETWGFIPYELLPNFRDLKANAPTGVHSVY
GIDGSPVAYTKMQGKRIEKAWVFVGMRRGGNAYYALDVTTPDNPSFMWKIDASSPGMGEL
GQSWSTPVVTTIPSATGDKPVLIFGGGYSPSTKDGAEIGTDDSSGRGVFIVDAQTGALIH
QFGGSGANTPLPGIANSIPSSVAVLDGNGDGHTDRIYATDIQGNVWRMDMPSANVSTWSG
FKFAALGDKSSVAGDRRFFSGPIVAQTLISNTFELTKVVNGTSTKVVTSQNIPYDAIVVG
SGHRAKPSDVSRSDMFFALQDRNIVTQSFQGKSNQKPVPKTLQLSDLYDVSSAAPNDQAS
EIVFSQKRGWYYNFSRKGEKSLSSATIVGGEVYFSSFVPGSDGSVNQCLSSGKGYLYKKN
LHRGTRGYKTDYLYAGELVLDTPQLVIPPAEQPKDPNAKVPTPDMFLIGIGNAVPDEATC
ESGNPKCIGGGPTTNKIYYYISQ
NT seq
3672 nt
NT seq
+upstream
nt +downstream
nt
atgagtcagtttttatttaaatgtcagaaaaagtcgttgatgatcttttcgcttaattac
gttttattgaaacatatttgtcaatctcgccttcaaaacgtccgccagacgttaacatca
atagtcgcttttattatttcgagcctcgttgtcggcgcggcgagtttatttaccgcgtca
agcgttgctgatgatacagagctttatgtgttcgaagcgtccgcccgtaatggctcgcgc
ccgcaggtgctgatcattttcgataactccggcagtatgagtaatcttgcctatggggtc
gatgctccttacgagaataaacggaatgctaactatgcccaatcgggaaaattattttat
agccgaggttcggctgataatgctgagttacctaatcctgcctcttcgcgtgaaaagcgt
cagtttaatgctgcgctcaatggctgtgaaagctcgtgggattacctcaatcggtatggc
acttttactggtttctttcgggaatatggtttttcggggggaactggtgcatggaaagaa
ttttctgagctaaacggtggctcgatagccgctgtcgattgttttgaagatatccaagat
gaaagactcggtaatgcagcaggagaggctaacggtttacccgttgacagtttaggctct
gcggctaaacccgttcggtacacggcagtcaatattcactcatccgagagtgctaaggca
agcgcgaaggcaaaggcgcagaaaacaggttttggctccggcaaagtggtcactgtttat
accgaagattatttaaaatggcaccatggtactaaaaagaaggtcaataaaacccgtcta
gagctggcgcaagatgcgattgaaagtgtggttttaactacgccgagtgtggattttggt
ttagctatttttaatatgaatgggccacgtgatggtgcgcgtgacggtgggcggattatc
tctgggattaagactatgtccgcccaagccaaaattgatttattgaaaagggtcaatctt
attagttatgcccaaaatacgccgctatgcgaaacgctctacgaagcctatcgttatttt
ggtgggcaggaacagtattttggtgatgatgatagcgattataattactacgataattgg
gggcgttaccaaggtacttacaacgccagttctaatccctttactgacccagctgcgctt
attattggaagtaacacgtacaattcgccgtttaagccttgccaaaatgaagcgtatatc
gtctatatcaccgacggtgagccgacgctggataacgcggccgatggcattattgagcgt
ttaaccaatggtgtaggtaagcatacctccaacccgaaaagttatctcagtgcgctttct
ggctggatgcgaactgaggatgtgaatcctaatttagccggaaaacaaaccgttagaacc
tttaccattgggtttagtgaaggtgcagccagtgccgagcacctactgaagcaaaccgcc
gataatggcggtggtaagtattttgatgccaccgatgccagtcaattacgttcttcattg
caaacggctttaaataatatcctcgaaaaaaatgccagctttacttccccctcggtagcg
agcaataacttcaatcgtactcaaacctttgattcagcttattactctatgttcttgcct
aataagggaccaagatggctagggaatattaaaaagttcaaagtgaccagtgacggtgat
gtcgttgatagcaaaggcaaaaatgtgataggcgaagatggcaatatcaaagccgatgct
tgctcctattggacatctgctgaagaatgcggaagcagcggtgatggtaacgatgttaag
cgtggcggggtgctagccgcgatgcagcaggcgactagtcgcactttatacagtaatttt
ggcagtggattgagcgcttttactctgtcaaatgcagctcgaaaagctggcgataatgtg
cgtttagccacctatatgggggtcgatgaaacagaactcacagggctatttgactgggcg
aagggaatcgatgttgataacgataaaaaccaggacttaagtaccgccagtggcgccacc
ccaaattggcgcgccgatataatgggagatgctctacattccaagcccttagcactcaat
tttggttctgaagctaaacccgatatccgaattcttgtcgggacgaaccatgggttcctg
catatgtttaaggatgaaggtgatagcgtgtctgagacttggggatttatcccctatgag
ctactgccgaattttcgcgatctcaaggctaacgcgccgacgggcgtacactcggtatac
ggtattgatggctcgccagttgcctacaccaaaatgcagggcaaacggattgaaaaggca
tgggtatttgtgggaatgcgccgaggcggcaatgcgtattacgccctcgatgtgaccaca
cctgataaccccagttttatgtggaagatagatgccagctcacccggtatgggcgagtta
gggcaatcttggtcgacgcctgtggtgacgacaattccgagtgcgactggcgataagcct
gtattgatttttggtggcggatattccccttcaactaaagatggcgctgagattggtact
gatgacagcagtggccgtggcgtgtttattgtcgatgcgcaaacgggggcgttaatccat
caattcggcggcagtggggctaacacgccattgccaggtattgcgaacagtattccaagc
agtgttgctgtattagacggcaatggtgatggtcataccgatagaatctatgccacagat
atccaaggtaatgtatggcggatggatatgccctccgcgaatgtgtcgacctggtcggga
tttaaatttgccgcattaggggataagagttcagtggcaggagataggcgattcttttct
gggcctatagtggcccagaccttgatctccaatacctttgagctgactaaagtcgttaat
ggaacatcgaccaaagttgtcacatcacagaatattccttacgacgcaattgttgtcggg
agtggccacagggcaaagccaagtgatgtgtctcgctcggatatgttttttgcattgcaa
gatagaaacatagtcactcaatcattccaaggtaaatcaaatcaaaagcctgtgcctaaa
acactacagttaagtgatttatatgatgtcagttcggcggcgcccaatgatcaggccagt
gaaatcgtctttagtcaaaaacgaggttggtactataacttctctcgtaaaggcgaaaaa
agcctgtcgtctgcgaccatagtcgggggggaggtgtacttcagcagttttgtgcctggt
agtgatggctcagtcaaccaatgtttgagttcgggtaagggctatctttataaaaagaat
ttgcacaggggtactcgtggttacaaaacggattatttgtatgcaggtgagttggtactg
gatacgccgcagttggtgatcccgcctgccgagcagcctaaggacccgaatgctaaagta
ccaacgccagatatgtttttgattggtatcggtaatgcagtgccagatgaggcgacatgt
gaaagtggtaaccctaagtgtattgggggcgggccaacaacgaacaaaatttattattac
atcagtcaatga
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