Shewanella xiamenensis: MKD32_05455
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Entry
MKD32_05455 CDS
T08228
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
sxm
Shewanella xiamenensis
Pathway
sxm00260
Glycine, serine and threonine metabolism
sxm00460
Cyanoamino acid metabolism
sxm00630
Glyoxylate and dicarboxylate metabolism
sxm00670
One carbon pool by folate
sxm00680
Methane metabolism
sxm01100
Metabolic pathways
sxm01110
Biosynthesis of secondary metabolites
sxm01120
Microbial metabolism in diverse environments
sxm01200
Carbon metabolism
sxm01230
Biosynthesis of amino acids
sxm01240
Biosynthesis of cofactors
sxm04981
Folate transport and metabolism
Module
sxm_M00140
C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:
sxm00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
MKD32_05455
09102 Energy metabolism
00680 Methane metabolism
MKD32_05455
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
MKD32_05455
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
MKD32_05455
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
MKD32_05455
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
MKD32_05455
Enzymes [BR:
sxm01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
MKD32_05455
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
Aminotran_5
OKR_DC_1
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
UML94767
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Position
1248224..1249477
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AA seq
417 aa
AA seq
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MLKKDMNIADYDPELFNAIQNETLRQEEHIELIASENYTSPRVMQAQGSQLTNKYAEGYP
GKRYYGGCEYVDVVETLAIERAKQLFGATYANVQPHSGSQANSAVYMALLKPGDTVLGMN
LAHGGHLTHGSPVNFSGKLYNIIPYGIDESGKIDYDEMERLAVEHKPKMMIGGFSAYSGI
VDWARMREIADKIGAYLFVDMAHVAGLIAAGVYPNPVPHAHVVTSTTHKTLAGPRGGIIL
SAADDEELYKKLNSAVFPGGQGGPLMHVIAGKAVAFKEALEPEFKAYQQQVVKNAKAMVE
VFLERGYKIVSGGTDNHLMLVDLIGRDLTGKEADAALGSANITVNKNSVPNDPRSPFVTS
GVRIGTPAITRRGFKEAEAKELTSWICDILDDAHNPAVIERVKGQVLALCARFPVYG
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgctgaaaaaagatatgaatatcgcagattatgatccggaactgtttaacgcaattcag
aatgaaactctgcgtcaagaagagcatattgagctgattgcttctgaaaactacaccagt
ccacgcgtgatgcaagcgcaaggttcacaattaaccaacaagtacgccgaaggctatcca
ggcaagcgttactacggtggttgtgagtatgtggacgtagttgaaaccttagcgattgag
cgtgcaaaacaactgtttggtgcgacctacgcaaacgtgcaacctcactcaggttctcaa
gcaaacagtgccgtttacatggcattgttaaaaccaggcgataccgttttaggtatgaac
ctcgctcacggtggtcacttgacccacggctcccccgtcaacttctccggcaagctgtac
aatatcattccttacggtatcgatgagtccggcaagattgactatgacgaaatggaacgt
ctggccgtcgagcacaagccgaagatgatgataggtggcttctccgcctactcaggtatc
gttgactgggcaagaatgcgcgaaattgcagacaaaatcggtgcttacctgttcgtcgac
atggctcacgtagccggtctgattgccgctggtgtgtatccaaacccagtgccacacgct
cacgttgtgacgtcaaccactcacaagaccttagccggtcctcgtggcggtatcattctg
tctgctgccgatgatgaagagctatacaaaaagctgaactctgcggtattcccaggcggt
caaggcggtcctttgatgcacgttatcgcgggtaaagcggtagccttcaaagaagcttta
gagccagagttcaaagcttaccaacaacaagtggttaagaacgctaaagccatggttgaa
gtgttcttagagcgcggttacaaaatcgtttcaggcggtactgacaaccacttaatgctg
gtggacttaatcggtcgcgacctgacgggtaaagaagccgatgccgcgttaggtagcgca
aacatcacagtaaacaaaaactctgtgccaaatgacccacgttctccattcgtgacctct
ggtgtacgtatcggtacgcctgcgatcactcgccgtggctttaaagaagctgaagcgaaa
gagttaaccagttggatctgtgacatcctcgacgatgctcacaatccagcggtcatcgag
cgcgtaaaaggccaagtattggcactgtgcgcccgtttccctgtttacggttaa
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