Shewanella xiamenensis: MKD32_06795
Help
Entry
MKD32_06795 CDS
T08228
Name
(GenBank) RNA polymerase sigma factor FliA
KO
K02405
RNA polymerase sigma factor FliA
Organism
sxm
Shewanella xiamenensis
Pathway
sxm02020
Two-component system
sxm02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
sxm00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
MKD32_06795
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
MKD32_06795
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sxm03021
]
MKD32_06795
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
sxm02035
]
MKD32_06795
Transcription machinery [BR:
sxm03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
MKD32_06795
Bacterial motility proteins [BR:
sxm02035
]
Flagellar system
Flagellar assembly proteins
Stator
MKD32_06795
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
UPF0122
HTH_23
HTH_10
PhyR_sigma-like
Motif
Other DBs
NCBI-ProteinID:
UML95012
LinkDB
All DBs
Position
1518270..1518983
Genome browser
AA seq
237 aa
AA seq
DB search
MNKAAAYTCLDNKTSIVEQYAPLVKRIAHHLLARLPASVQLDDLLQAGMMGLLEASSKFD
GGKGAKFETFAGIRIRGAMLDEIRRGDWVPRSVHRNNRRVAQAIDELEQVLGRDARDTEI
AEKLDMTLDEYHHILNDVSVGKIIGIEDLGVSQDILTTSDDISDGTFEVLAETQFHSALV
EAIKLLPERDALVLSLYYDEALNLKEIGAILEVSESRVSQILSQAMLRLKGKLKHWT
NT seq
714 nt
NT seq
+upstream
nt +downstream
nt
gtgaataaagccgcagcgtatacttgtttagacaataaaacgtcaatcgttgaacagtat
gcaccgttggttaaaagaattgcacatcacttgctcgccagattacctgcctctgtgcag
ttagatgacctgctacaggcggggatgatgggattattagaagcatcatctaagtttgat
ggcggtaaaggtgcaaagtttgaaaccttcgccggcataaggatccgtggcgccatgttg
gatgaaatccgccgtggcgattgggttcctcgttctgtccaccgaaataatcgtcgagtt
gcccaagccattgatgaattagagcaagtgctaggtcgtgatgcgcgcgacacagaaatt
gcagaaaaacttgatatgacgctcgatgagtaccatcatattcttaatgatgtttctgtt
ggtaaaatcatagggatagaagacttaggcgtatcacaggatatactcactacaagcgat
gatattagcgatggtacgtttgaggtcttggcagaaacccagtttcattctgcacttgtt
gaggcgataaaattattgcccgaaagggatgcgctagtgctatcgttatactacgatgaa
gcattgaatttaaaagagattggcgccattcttgaggtaagcgaatcgcgtgttagccag
atattaagtcaggcaatgttgcgactcaaaggcaaactcaagcattggacataa
DBGET
integrated database retrieval system
