Shewanella xiamenensis: MKD32_06885
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Entry
MKD32_06885 CDS
T08228
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
sxm
Shewanella xiamenensis
Pathway
sxm00521
Streptomycin biosynthesis
sxm00523
Polyketide sugar unit biosynthesis
sxm00525
Acarbose and validamycin biosynthesis
sxm00541
Biosynthesis of various nucleotide sugars
sxm01100
Metabolic pathways
sxm01110
Biosynthesis of secondary metabolites
sxm01250
Biosynthesis of nucleotide sugars
Module
sxm_M00793
dTDP-L-rhamnose biosynthesis, glucose-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
sxm00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
MKD32_06885 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
MKD32_06885 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
MKD32_06885 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
MKD32_06885 (rfbB)
00525 Acarbose and validamycin biosynthesis
MKD32_06885 (rfbB)
Enzymes [BR:
sxm01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
MKD32_06885 (rfbB)
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Motif
Pfam:
GDP_Man_Dehyd
Epimerase
Polysacc_synt_2
3Beta_HSD
RmlD_sub_bind
NAD_binding_4
adh_short
Sacchrp_dh_NADP
KR
Motif
Other DBs
NCBI-ProteinID:
UML95028
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Position
1539266..1540336
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AA seq
356 aa
AA seq
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MKILVTGGAGFIGSAVVRHIISNTHDSVINLDKLTYAGNLESLVSVAASERYAFEQVDIC
DRVELDRVFAKHQPDAVMHLAAESHVDRSIIGPADFIQTNIVGTYTLLEAARHYWMQLDA
ERKAVFRFHHISTDEVYGDLLHPDEVAADSELPLFTESTPYAPSSPYSASKASSDHLVRA
WLRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKPLPIYGKGDQIRDWLYVEDHA
RALYKVVTEGKVGETYNIGGHNEKQNLEVVQTICRILDSLVPQNTPYAEQITYVTDRPGH
DRRYAIDASKMSAELNWQPQETFETGLRKTVEWYLANQEWCQHVQDGTYQRERLGI
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
gtgaaaatccttgtaactggcggcgccggttttattggctcagcagtcgttcgtcatatc
atcagcaacactcacgatagcgtaattaaccttgataaactgacctatgcaggcaattta
gaatccttggtgagcgtggcggcaagcgagcgttacgcatttgagcaagtagatatttgt
gaccgagttgaattagatagagtatttgctaagcatcaacccgatgccgttatgcatttg
gcggcagaatcccatgttgatcgctcaattatcggccctgcagattttattcaaactaat
attgttggcacttacacgctgctcgaagctgctcgccattactggatgcaacttgatgct
gagcgtaaagctgtattccgtttccatcatatctccaccgatgaagtatatggcgattta
ctgcatccagatgaagtggcggcagactctgaactgcctttattcaccgaaagcacacct
tatgcgcccagcagcccttattctgcttctaaagcttcgagcgatcacctagtacgagca
tggttacgtacctatggtttaccgactattgtgactaattgttccaataactatggccct
tatcattttccagaaaagttaattcctctggtaatccttaatgcacttgaaggcaagcca
ttgcccatttacggtaaaggcgatcaaatccgtgattggctatatgtcgaagaccatgct
cgagcgttatacaaagtcgttaccgaaggtaaggttggtgaaacctacaatataggtggc
cataacgaaaagcagaacttagaagtggttcaaaccatttgccgcatcttagattcatta
gtgcctcaaaacacaccttacgctgagcaaattacctatgtcactgatagacctggccat
gatcgccgttatgccattgatgcaagcaaaatgagtgcagagcttaattggcagccacaa
gagacttttgaaacgggtctacgcaaaactgtcgagtggtatttagctaaccaagaatgg
tgccagcatgtacaggatggtacttatcagcgtgagcgtttaggcatttaa
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