Shewanella xiamenensis: MKD32_07030
Help
Entry
MKD32_07030 CDS
T08228
Name
(GenBank) proline--tRNA ligase
KO
K01881
prolyl-tRNA synthetase [EC:
6.1.1.15
]
Organism
sxm
Shewanella xiamenensis
Pathway
sxm00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
sxm00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
MKD32_07030
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
sxm01007
]
MKD32_07030
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sxm03016
]
MKD32_07030
Enzymes [BR:
sxm01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.15 proline---tRNA ligase
MKD32_07030
Amino acid related enzymes [BR:
sxm01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
MKD32_07030
Transfer RNA biogenesis [BR:
sxm03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
MKD32_07030
Prokaryotic type
MKD32_07030
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
tRNA_edit
HGTP_anticodon
TIR_2
Motif
Other DBs
NCBI-ProteinID:
UML95054
LinkDB
All DBs
Position
complement(1569391..1571103)
Genome browser
AA seq
570 aa
AA seq
DB search
MRVSKYLLSTQKETPANAEVISHQLMLRAGMIRRNASGLYSYLPTGLRVLRKVEAIVREE
MNKAGAIEILMPMVQPADLWVETGRWDKFGPELLRFKDRHSRDFVLGPTHEEVITDLIRK
EVSSYKQLPLNLYQIQTKFRDEVRPRFGVMRSREFLMKDAYSFHLDVDTMNETYEAMYQA
YSNILSRMGLAFRPVLADTGSIGGSMSHEFHVLAQSGEDLIAYSTGSDYAANIEKAESPM
PTETRGAATEALRLVDTPNAKTIAELVEQFGLDITKTVKTLIVKGATEAAPLVALIVRGD
HELNEIKADKLDLVASPLEFAPEALIRDAIGAGPGSLGPVGLNMPIIIDHSVSVMSDFAA
GANVDDKHYFGINWERDLPLAQAADIRNVVEGEPTPDGLGTYAMARGIEVGHIFQLGTNY
SKSMNATVLDENGKSQVLLMGCYGVGVSRIVAAAIEQNFDDRGIVWPEAIAPFSVGILPM
NMHKSHRVTDIAEQLYKDLSAAGIDVLLDDRKERPGVMFADMELIGIPHTVVIGDRNIDA
GVFEYKNRRTGEKQDVPFDQIVDFLKNLQA
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgttagcaaatacctactttctactcaaaaagaaacacctgcgaatgcagaagtc
atcagccatcaattaatgctacgtgcgggtatgatccgccgtaacgcttcaggcctatac
agctatctgcccacgggcctgcgtgtattacgtaaagtcgaagcgattgttcgtgaagaa
atgaacaaagcgggcgcgattgaaatcctaatgcctatggtgcaaccggctgatttatgg
gtagaaacgggtcgctgggacaagtttggtcctgaactactgcgttttaaagaccgtcat
agccgtgacttcgttctgggaccaacccacgaagaagtgatcaccgacttaatccgtaaa
gaagtcagctcttacaaacaattaccgctgaatctttatcaaattcaaactaaattccgc
gacgaagttcgcccacgttttggcgtgatgcgttctcgcgagttcctgatgaaagatgct
tattctttccatcttgatgtggataccatgaatgaaacctatgaggcgatgtatcaagcc
tatagcaacattctgtcgcgcatgggcttagccttccgtccggttttagcggacacgggt
tctatcggtggcagcatgtcacacgagttccatgtattagcgcaaagcggtgaagactta
atcgcctactctacgggtagcgattatgccgctaacatcgagaaagccgaatcaccaatg
ccaaccgaaacgcgcggcgcggcgactgaagcattacgtttagtcgataccccaaatgcg
aaaaccattgccgagttagttgagcaattcggtttagatatcactaaaacagtgaaaacc
ttgattgttaagggtgcgactgaagcggcgccactggttgcgctgattgtacgtggtgac
cacgagctaaatgaaatcaaagcagataaattagatttagtggcatcaccattagaattt
gccccagaagccctgatccgtgacgccattggcgcaggtccaggctcattaggccctgtc
ggcctgaatatgccgatcatcatcgaccatagcgtaagcgtgatgagcgattttgctgcc
ggcgcaaacgtggatgataaacactactttggcatcaactgggagcgcgatctgccactg
gcacaagcggccgatatccgtaacgtggttgaaggcgagccaacaccggatggtttaggt
acctatgccatggctcgtggtatcgaagtgggtcatatcttccaactcggcactaactat
tctaaatcgatgaatgcgactgttctcgatgagaacggtaaatcacaggtgctgctgatg
ggttgttacggtgttggcgtgagccgtatcgtggctgctgcgattgagcaaaactttgat
gaccgtggcattgtatggccagaagcgattgcaccattcagtgtgggcattctgccaatg
aatatgcacaagtcgcaccgcgtcaccgatatcgccgagcagttatacaaagacttaagt
gctgcgggtatcgatgtcctgttggatgaccgtaaagagcgtccaggcgtaatgttcgcc
gatatggagctcattggtattcctcacactgtggtgattggtgatcgcaatatcgacgcg
ggtgtatttgaatacaaaaaccgtcgcaccggtgaaaaacaagacgtgccattcgaccaa
atcgtcgatttcttaaagaatctgcaagcttaa
DBGET
integrated database retrieval system
