Shewanella xiamenensis: MKD32_08070
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Entry
MKD32_08070 CDS
T08228
Name
(GenBank) 3'-5' exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
sxm
Shewanella xiamenensis
Pathway
sxm03030
DNA replication
sxm03430
Mismatch repair
sxm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sxm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MKD32_08070
03430 Mismatch repair
MKD32_08070
03440 Homologous recombination
MKD32_08070
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sxm03032
]
MKD32_08070
03400 DNA repair and recombination proteins [BR:
sxm03400
]
MKD32_08070
Enzymes [BR:
sxm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
MKD32_08070
DNA replication proteins [BR:
sxm03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
MKD32_08070
DNA repair and recombination proteins [BR:
sxm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
MKD32_08070
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
CAF1
Motif
Other DBs
NCBI-ProteinID:
UML95238
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All DBs
Position
1826060..1826737
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AA seq
225 aa
AA seq
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MGAWLINAKLQWRALRCQHQLFKDYYQSLIPLMALPINRAPLMAMDLEMTGLDPLQDQIL
SIGLVPIENGVIPLGEAQQKLVQIKGSVGQSATIHGILDNHLIQAVSIEEAMAWFIAQTR
GRVLVAHHSPLDCRFLQQDILAIYHQAVSLPAIDTLVLEKQRLLREHSVLKEGSLRLGAC
RERYHLPIYGAHSALTDALACAELLLAQVAAMGGGADISVGDLLT
NT seq
678 nt
NT seq
+upstream
nt +downstream
nt
atgggcgcttggttgattaatgctaagttgcaatggcgagcactgcgctgtcagcatcaa
ttatttaaggattattatcagtccttaatcccgctgatggcgctgcccatcaatcgtgct
cccttgatggcgatggatttggagatgacagggttagatccccttcaggatcaaatctta
agcattggcttagtccccattgaaaatggagtgatcccccttggtgaggcgcagcaaaaa
ttagtgcaaattaagggcagtgtcggccaaagtgcgacgattcatgggattctcgataac
catttaatccaagcggtgagcattgaggaggctatggcatggtttattgctcaaacccgt
ggccgagtattagttgcccatcactccccactggattgtcgttttttacaacaagatata
ttggctatctatcaccaagccgtttcactccccgctatagataccttagtacttgagaaa
cagcgattattacgcgagcattcggtacttaaagaaggaagtctaaggcttggggcctgt
cgagagcgttatcacttaccgatttacggtgcccatagtgcattaaccgatgcgttagcc
tgtgcggagttattattagcacaagttgcggccatggggggaggtgcagatatttcggtc
ggggatttactgacctaa
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