KEGG   Shewanella xiamenensis: MKD32_08070
Entry
MKD32_08070       CDS       T08228                                 
Name
(GenBank) 3'-5' exonuclease
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
sxm  Shewanella xiamenensis
Pathway
sxm03030  DNA replication
sxm03430  Mismatch repair
sxm03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:sxm00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    MKD32_08070
   03430 Mismatch repair
    MKD32_08070
   03440 Homologous recombination
    MKD32_08070
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:sxm03032]
    MKD32_08070
   03400 DNA repair and recombination proteins [BR:sxm03400]
    MKD32_08070
Enzymes [BR:sxm01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     MKD32_08070
DNA replication proteins [BR:sxm03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     MKD32_08070
DNA repair and recombination proteins [BR:sxm03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     MKD32_08070
SSDB
Motif
Pfam: RNase_T CAF1
Other DBs
NCBI-ProteinID: UML95238
LinkDB
Position
1826060..1826737
AA seq 225 aa
MGAWLINAKLQWRALRCQHQLFKDYYQSLIPLMALPINRAPLMAMDLEMTGLDPLQDQIL
SIGLVPIENGVIPLGEAQQKLVQIKGSVGQSATIHGILDNHLIQAVSIEEAMAWFIAQTR
GRVLVAHHSPLDCRFLQQDILAIYHQAVSLPAIDTLVLEKQRLLREHSVLKEGSLRLGAC
RERYHLPIYGAHSALTDALACAELLLAQVAAMGGGADISVGDLLT
NT seq 678 nt   +upstreamnt  +downstreamnt
atgggcgcttggttgattaatgctaagttgcaatggcgagcactgcgctgtcagcatcaa
ttatttaaggattattatcagtccttaatcccgctgatggcgctgcccatcaatcgtgct
cccttgatggcgatggatttggagatgacagggttagatccccttcaggatcaaatctta
agcattggcttagtccccattgaaaatggagtgatcccccttggtgaggcgcagcaaaaa
ttagtgcaaattaagggcagtgtcggccaaagtgcgacgattcatgggattctcgataac
catttaatccaagcggtgagcattgaggaggctatggcatggtttattgctcaaacccgt
ggccgagtattagttgcccatcactccccactggattgtcgttttttacaacaagatata
ttggctatctatcaccaagccgtttcactccccgctatagataccttagtacttgagaaa
cagcgattattacgcgagcattcggtacttaaagaaggaagtctaaggcttggggcctgt
cgagagcgttatcacttaccgatttacggtgcccatagtgcattaaccgatgcgttagcc
tgtgcggagttattattagcacaagttgcggccatggggggaggtgcagatatttcggtc
ggggatttactgacctaa

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