Shewanella xiamenensis: MKD32_08160
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Entry
MKD32_08160 CDS
T08228
Name
(GenBank) SMC family ATPase
KO
K03546
DNA repair protein SbcC/Rad50
Organism
sxm
Shewanella xiamenensis
Brite
KEGG Orthology (KO) [BR:
sxm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sxm03400
]
MKD32_08160
DNA repair and recombination proteins [BR:
sxm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
MKD32_08160
Archaeal homologous recombinant proteins
MKD32_08160
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
SMC_N
AAA_29
nSTAND3
AAA_21
GTP_EFTU
cobW
Motif
Other DBs
NCBI-ProteinID:
UML95252
LinkDB
All DBs
Position
1844958..1848014
Genome browser
AA seq
1018 aa
AA seq
DB search
MKPLQLSMSAFGPFASTQTIDFTELGDNPLFLINGPTGAGKTTLLDGICFALYGKTTGNE
REGSQMRCDMADDNLLTEVTFSFKLGNTAYRIRRVPEQDRLKKNGEGSTVQKSEAQLFKI
APDGTETLLVASKVSEATAEIEALTGLDVEQFRQVMVLPQGKFRELLMADSKAREQIFSQ
LFQTHIYKRIEDILKAKAADIRGLVKEQRARRDGILQTAELASDDELAAEFSRIEPELAA
AIAAKERSTAAHLQALKQHDSAQQRFAEFTRLSELESQATLLHEQQADIAAQTARLNVAK
QAQRLKPLLDNALSREQEATIANDQRSHAQMVLEAAKLALAKAEIEAQELIPLEQQLRDF
EQQHNQLSTLVPQLAEFSSLEQALSQAKEILQQTKEQGQETKTALVSLVDQRSTYENQLP
ALQQQSERQLATAQALQQQRHLLELFKQWQQICAKVAQTEEALVQAGLQGKTLSAQHQAA
LSDYKSLQLSWFQGQAAILARELKLDEPCPVCGSIEHPHPATSHDHLPTDAQLQAAQDAE
VNALEQLSKARAEYRGLQKQLEAQQSQANELASSLGDTVELPLESHVQRLEELTRQAKQA
EVATQALQQLQQQIKALQQQELVLMQQLELERERYHQQEGEVARLSGQLAEKALRIPDEY
RSLTALNQAINNNQRQLENTREQIHALRNSLKQASEHCVAAQTALEAAIQRCHSADEQQA
LADGDLNSQLHLAGFTDRDALRAALLADEQIQVLGERIETYHRQCALNQSQLDQLRTELT
DVSVPDLDALEAMLAEKHQQLNLAEATWSQLNTRFSLLKQTQTQLSIVDQKAKALEDEYA
IIGTLADVANGNTGNKISLQRFVLSVLLDDVLLAATQRLHLMSKGRYRLLRKEDRAKGNK
ASGLELEVEDAYTAKVRPVATLSGGESFMAALSMALGLSDVVQAYAGGIKLDTLFIDEGF
GSLDQDSLELAIRTLMDLQSAGRMIGVISHVSEMKEQINTRIDLLKTSHGSEIKVILP
NT seq
3057 nt
NT seq
+upstream
nt +downstream
nt
atgaagccactacaactttccatgtcggcttttggcccgtttgcgtcgactcagaccatt
gattttactgaacttggtgataatccgttatttttgatcaacgggccaactggcgcgggt
aaaacgactctgctcgatggtatctgctttgcgttgtatggaaaaaccaccggcaatgag
cgtgaaggcagccaaatgcgctgcgatatggccgatgataatctgcttactgaagtgacc
tttagttttaaattgggtaacactgcttatcgtattcgccgagtgcccgaacaggacaga
ctcaaaaagaatggcgagggttcgacagtccaaaagagcgaggcgcagctgtttaagatc
gctcccgatggtactgaaaccctattagtcgccagtaaagtctcagaggcaacggctgaa
attgaagcgttaacgggcttagacgtagaacaatttcgtcaggttatggtgctgccacag
gggaagtttcgtgaattactcatggctgactccaaggcgcgtgagcaaatttttagtcaa
ttatttcaaacccatatctataaacgtattgaagatatcttaaaggcgaaggcggccgat
atccgcggcttggttaaagagcagcgtgcgcgtcgcgatggcattctacaaaccgcggag
ctagccagtgacgacgagcttgccgctgaatttagtcgaatagaacccgaattggcggcc
gctatcgccgcgaaagaacgtagcacggcagcgcatctacaggcgttaaaacagcatgac
agtgcgcagcaacggtttgctgaatttacccgtttaagtgaattggaatcccaagccact
ttgcttcatgaacagcaagcagatattgcagcgcaaacggctcgcctgaatgtggcaaag
caagcgcagcgtctaaagcccttattagataatgcgttatcgagggagcaggaagcgaca
attgctaatgatcagcgcagccatgcccaaatggtacttgaagcggcaaagcttgcgctt
gccaaagctgagatcgaagcgcaggaacttattccccttgaacaacagctgcgcgatttt
gaacaacaacataatcaactcagcacgttagtaccgcagttggcagaattttctagcctt
gaacaagctttatcgcaggcaaaagagatactgcaacaaacaaaagagcaggggcaagag
actaagacggcgcttgtaagcttagttgatcagcgcagcacctatgaaaatcaattgcca
gcattacaacagcaaagtgagcgtcaactcgcgaccgcacaagccttgcagcaacagcgc
cacttacttgagttgttcaaacaatggcaacaaatttgcgccaaagttgcacaaaccgaa
gaggcgcttgtacaagcaggattacaaggaaagacgctgagcgcgcagcatcaggcagcg
ctaagtgactataagtctttacagctcagttggtttcaaggtcaagcagccattttagcg
agggaactcaaactcgatgaaccctgcccagtttgcggcagtatcgagcatcctcatcct
gcaaccagtcatgatcatttaccaacggacgcacagctgcaagctgcgcaggatgccgag
gtgaatgcactcgaacagctcagcaaagcgagggcagagtatcgggggctacaaaaacag
ttagaagcacagcagtcgcaggcaaatgaactggcctcctcgctgggggatacggttgag
ttaccacttgaatcgcatgtccaacggcttgaggaattaacacgccaagcaaaacaagct
gaagtcgccacccaagcattgcagcagttacagcagcaaatcaaagcgttgcagcagcaa
gagttagtattgatgcaacaattagagcttgagcgtgagcggtatcatcaacaagaaggt
gaagtggcgcgtctatccggtcaattagcggaaaaggcgcttcggatccctgacgaatac
cgctcgcttactgcgttaaatcaagcgattaataataatcaacggcagcttgagaacact
cgtgaacagattcatgctcttagaaactcactaaagcaggcatctgagcattgtgtggcg
gcgcaaacggcgctagaggctgcgatacaacgctgccatagcgcagatgagcagcaggct
ttggccgatggtgaccttaactcacaactgcatttagcgggttttactgatagggacgca
ttaagggcggcattattagccgatgagcaaattcaagtgttgggcgagcgtattgaaacc
tatcatcgacagtgcgccttaaatcaatcacagcttgatcagctaagaactgagcttact
gatgtcagcgtacccgaccttgatgccctagaagcgatgctcgcagaaaagcaccaacaa
cttaatctcgctgaagctacatggagccaacttaatacgcggttctctttgcttaaacaa
actcaaacacagctcagtattgtcgatcaaaaagcgaaagcccttgaggatgaatacgcc
attattggcaccttggccgatgtggccaatggcaataccggcaacaagatttctctgcaa
cgttttgtattaagcgtattactcgatgatgttttactcgcagcaactcagagattacac
ctgatgagtaaaggccgttatcgattactgcgtaaagaagacagagcgaagggaaataag
gcatcagggcttgagcttgaagtcgaagacgcttacaccgcaaaagtgcgtcccgtggcg
accttaagtggtggggagagttttatggcagctttatctatggcgctgggtttatctgac
gtggtgcaagcctacgccggtgggataaaacttgatacgttatttatcgacgaaggtttt
ggcagcctagatcaggactcccttgaacttgccatccgtaccttaatggatttgcaatcg
gcgggtaggatgatcggcgtgatatcccatgtttctgagatgaaagagcagataaatacc
cgaatagatctcttgaaaacctcccatgggagcgaaatcaaggtgattttgccttag
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