Shewanella xiamenensis: MKD32_08385
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Entry
MKD32_08385 CDS
T08228
Symbol
rluC
Name
(GenBank) 23S rRNA pseudouridine(955/2504/2580) synthase RluC
KO
K06179
23S rRNA pseudouridine955/2504/2580 synthase [EC:
5.4.99.24
]
Organism
sxm
Shewanella xiamenensis
Brite
KEGG Orthology (KO) [BR:
sxm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sxm03009
]
MKD32_08385 (rluC)
Enzymes [BR:
sxm01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.24 23S rRNA pseudouridine955/2504/2580 synthase
MKD32_08385 (rluC)
Ribosome biogenesis [BR:
sxm03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
MKD32_08385 (rluC)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
DUF3603
Motif
Other DBs
NCBI-ProteinID:
UML95295
LinkDB
All DBs
Position
1895345..1896304
Genome browser
AA seq
319 aa
AA seq
DB search
MNTESPQQQVQLITIDEDHLDQRIDNFLITALKGVPKSMIYRIVRKGEVRVNKKRIKPEY
KLQIGDVVRVPPVRMAESDNRTAPSANLSKVSQLEDRILHEDNHLIVLNKPAGIAVHGGS
GVDYGVIEALRSLRPQQKFLELVHRLDKDTSGVLLVAKKRSALKHMHDQLRYKKMQKDYL
ALVKGEWSAQDKVVKQPLLKLTLKSGERIVRVNAEGKPSETRFKIVQRYQGCTLVQASPV
TGRTHQIRVHCQYAGHPIACDDKYSEQAFDDSMRSLGLSRLFLHAAELMFIHPENDEVMR
VSAPLDDNLQQLLNKLKRV
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atgaatacagaatctccacagcaacaggtgcagttgatcaccattgacgaagaccacctc
gaccaacgaattgataattttttaatcacagcgctcaaaggtgtacctaagagcatgatt
tatcgtatcgtccgtaagggcgaagtacgggtgaataagaagcgcattaagccagaatat
aaattacaaattggtgatgtggtacgtgtgccacccgtgagaatggctgagtctgataat
cggactgcgccttcggctaacttgagcaaagtgtcgcaactcgaagatcgtattttgcat
gaagataatcatcttattgtgctcaataaacctgcgggtattgcggttcatggcggcagt
ggtgttgattatggtgtgattgaagcgctgcgctccttacgtccgcaacagaagttttta
gagttggttcatcgccttgataaagatacctctggcgtactgttagtcgctaaaaaacgc
agtgcgcttaaacatatgcacgatcaactgcgttataaaaaaatgcagaaggattactta
gctttagttaagggggaatggtcggcgcaggataaagtggtcaaacaacctttattaaag
ctgacacttaaatccggtgagcgcattgtgcgggtcaatgcagaaggcaaaccatcagaa
acgcgttttaaaattgtgcagcgttatcaaggttgtacattggtgcaggcgagtccggtc
acgggacgtactcatcaaattcgcgtgcattgtcaatatgccgggcatcccattgcctgt
gatgataagtacagtgagcaagctttcgatgacagtatgcgctcgcttggcttgagtaga
ttgtttttacacgcagcagaattaatgtttatccatcctgaaaacgatgaagtgatgcgg
gtttctgcaccactggatgataatctgcagcaactgttgaataagttaaagcgggtttaa
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