Shewanella xiamenensis: MKD32_08915
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Entry
MKD32_08915 CDS
T08228
Name
(GenBank) RsmB/NOP family class I SAM-dependent RNA methyltransferase
KO
K03500
16S rRNA (cytosine967-C5)-methyltransferase [EC:
2.1.1.176
]
Organism
sxm
Shewanella xiamenensis
Brite
KEGG Orthology (KO) [BR:
sxm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sxm03009
]
MKD32_08915
Enzymes [BR:
sxm01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.176 16S rRNA (cytosine967-C5)-methyltransferase
MKD32_08915
Ribosome biogenesis [BR:
sxm03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
MKD32_08915
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Methyltr_RsmB-F
RsmF-B_ferredox
Methyltransf_31
Ubie_methyltran
FtsJ
Methyltransf_25
TRM5-TYW2_MTfase
GCD14
Methyltransf_4
Methyltr_RsmF_N
MTS
PrmA
Methyltransf_5
Methyltransf_15
Motif
Other DBs
NCBI-ProteinID:
UML95390
LinkDB
All DBs
Position
2013679..2014893
Genome browser
AA seq
404 aa
AA seq
DB search
MLNSPLSASSNELVINILAMVLSEGKPLDRAYSQHFSGLKLVPAEQARIATVTGDILRRL
NLYCFLADIKPEEMARLGSKLLNVWHLFHALELPKMQYSLPVDTDDLAARIEQAKTNPVL
WDGCPEWLDTMGHEQLGASWEKERAALSTPPKRFLRVNGLKVTRDELTQKLAAEFVSTQA
VESVDSALEVTSDSALFRTNSFKDGLFEQQDAGSQRVAAALDAKPGMRVIDACAGAGGKT
LHIAAQMQGKGRLLAMDVEQWKLDNLKERARRNGAHNIETRLIVGSKTIKRLKLSADRVL
LDVPCSGLGVLKRNPDAKWRDTAERLPVLMELQKHILSSYSRMVKVGGIVVYATCSIFPC
ENRGQVDAFLAENPNFRLLEDETISPADTGFDGFYLAKLERIQE
NT seq
1215 nt
NT seq
+upstream
nt +downstream
nt
atgttgaattctccgctttctgccagctcgaatgaattagtgatcaatatcttagctatg
gtgctaagcgaaggaaaacccttagaccgggcttattctcagcatttttcaggattaaag
ttagtacccgccgagcaggcgcggatcgcgactgtaacgggcgatattctacgccgctta
aatctttactgtttcttagccgacatcaagccggaagaaatggcgcgtttaggctcaaag
ctacttaatgtgtggcacttatttcacgcgctggaactgcctaaaatgcagtactcactg
ccagtggatactgatgatttagccgcgcgtattgaacaggctaaaactaaccccgtactt
tgggacggttgcccggaatggttagataccatgggacatgagcagttgggggcttcgtgg
gaaaaagagcgcgcggccttaagcacgccacctaaacgtttcctgcgggttaatggttta
aaagtcacccgtgatgaattaacgcaaaaattagcggccgaatttgtctcgactcaagcg
gtcgaaagcgttgactctgcccttgaagtgacatcggattctgcactgtttcgtaccaat
agctttaaagatggcttatttgagcagcaagatgcgggctcacaacgggtagccgcagcg
ctcgatgccaaaccgggtatgcgagtgattgatgcctgcgccggtgctggcggaaaaacc
ttgcatattgctgcacaaatgcaaggtaaagggcgtttgttagcgatggatgtggagcaa
tggaaactcgacaatctgaaagagcgcgcccgtcgtaatggtgcccacaatatcgaaaca
cggttaattgtcggttctaaaaccattaaacgcttaaaacttagcgccgatcgcgtcctg
ctcgatgtgccctgttctggccttggggtattaaagcgtaatcccgacgccaaatggcgt
gataccgctgaacgtttacctgtgttgatggaactgcaaaagcatattctcagcagttac
agtcgcatggtgaaggtcggtggcattgtggtgtacgcgacttgctcgattttcccctgc
gaaaaccgcggtcaagtggatgcctttttagctgaaaatcccaatttccgtttactcgag
gatgaaacgatcagtccagccgatactggttttgatggtttttatctcgcaaagcttgaa
cgcattcaagaataa
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