Shewanella xiamenensis: MKD32_08925
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Entry
MKD32_08925 CDS
T08228
Name
(GenBank) D-alanine--D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
sxm
Shewanella xiamenensis
Pathway
sxm00470
D-Amino acid metabolism
sxm00550
Peptidoglycan biosynthesis
sxm01100
Metabolic pathways
sxm01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
sxm00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
MKD32_08925
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
MKD32_08925
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
MKD32_08925
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
sxm01011
]
MKD32_08925
Enzymes [BR:
sxm01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
MKD32_08925
Peptidoglycan biosynthesis and degradation proteins [BR:
sxm01011
]
Precursor biosynthesis
Amino acid ligase
MKD32_08925
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
ATP-grasp
RimK
Motif
Other DBs
NCBI-ProteinID:
UML95391
LinkDB
All DBs
Position
complement(2017553..2018563)
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AA seq
336 aa
AA seq
DB search
MSKINLLLLCGGGSAEHDISLLSANYFETSLAKSEQFNVLRVVLDKFGQYQTAAGDDCEL
TNNREIRFRDESKAPWPVDYVIPCIHGYPGETGDIQSYFNLIQLPYFGCESEASSNCFNK
ITAKMWFSALGIPNTPYIFLNQYDDEAIAQTQAALENWGSIFVKAASQGSSVGCYKVDEA
SKVSEVLKDAFGYAPYVIVEKTIKARELEVAVYEYQGEVIATLPGEIICDSNTFYTFDEK
YAKNSKARTDVVAQNVPTEISDQIRAYAIKAFKGMKLRHLSRIDFFLTADNEILLNEINT
FPGSTPISMFPKMLQNHGHDFTQYLSLVINSQLAVK
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaagatcaatttacttttgctgtgcggcggtggaagtgcggaacacgatatttcc
ctactgtcggctaattattttgaaacctcgttagcaaaatcagaacagttcaatgtacta
cgtgtagtactggataaatttggccaataccaaaccgccgcaggcgatgactgcgagctg
accaataaccgtgagatccgctttcgtgacgagagcaaagccccttggcccgtggattat
gtgatcccttgtattcacggttacccaggtgagacaggcgacattcagtcttactttaat
cttatccaactgccctactttggatgcgaatccgaagcgagcagtaactgctttaataag
atcaccgccaaaatgtggttcagcgccttaggcattcccaacacaccttatatcttttta
aatcaatacgatgatgaagccattgctcaaactcaagctgcacttgaaaattgggggtca
attttcgtcaaggctgcgtctcaaggctcatcggtcggttgctataaggtggatgaggct
agcaaagtgagcgaagtactcaaagatgcctttggttatgcgccctacgtgattgttgaa
aaaaccattaaagcccgtgaacttgaagtcgcggtctatgagtatcaaggtgaagtgatc
gccaccctacccggcgaaatcatctgcgatagcaataccttctacaccttcgatgaaaag
tacgcgaaaaacagtaaggcgcgaaccgatgtcgtcgcgcaaaatgtaccgactgaaatc
agcgatcagatccgagcctatgcgattaaagcctttaaaggcatgaagttacgtcacctg
tcccgtatcgactttttcttaaccgcggacaatgaaatcctgctgaacgaaatcaatacc
ttcccaggttcgacgcccatttcgatgttccctaagatgctgcaaaatcatgggcatgat
ttcacccaatacttaagtttagtgattaacagtcagttagcggtaaagtaa
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