Shewanella xiamenensis: MKD32_09675
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Entry
MKD32_09675 CDS
T08228
Symbol
thiC
Name
(GenBank) phosphomethylpyrimidine synthase ThiC
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
sxm
Shewanella xiamenensis
Pathway
sxm00730
Thiamine metabolism
sxm01100
Metabolic pathways
sxm01240
Biosynthesis of cofactors
Module
sxm_M00127
Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP
Brite
KEGG Orthology (KO) [BR:
sxm00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
MKD32_09675 (thiC)
Enzymes [BR:
sxm01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
MKD32_09675 (thiC)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiC_Rad_SAM
ThiC-associated
Motif
Other DBs
NCBI-ProteinID:
UML95529
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Position
2198775..2200928
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AA seq
717 aa
AA seq
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MSSLESSSESLAVNTHGQTNRRVARAEAQAFIDTLKPLQHPNSQKLYLQGSRADLRVGMR
QILQTDTRIGGTAIAANVEKNPPIPVYDCAGPYSDLAAQINVRQGLAKLRLPWIIERQDT
EVLDCATSDFTQQRLKDDGLDHLRFEAGSSAIVRPRRALPGKRVSQLHYARQGIITPEME
YVAIRENMALAQVQDEILNRRGHGESFGAVIGKPITPEFVRDEIARGRAIIPLNINHPEA
EPMIIGRNFLVKVNANIGNSAVTSSIEEEVEKLVWSTRWGADTVMDLSTGRYIHETREWI
IRNSPVPIGTVPIYQALEKVNGVAEHLTWEVFRDTLIEQAEQGVDYFTIHAGVLLRYVPM
TAKRVTGIVSRGGSIMAKWCLSHHQENFLYTHFREICELCVAYDVSLSLGDGMRPGSIAD
ANDEAQFAELETLGELVKIAWEYDVQTIIEGPGHIPMQLIKENMDKQLIHCAEAPFYTLG
PQITDIAPGYDHFTSGIGAAMIAWYGCAMLCYVTPKEHLGLPNKQDVKQGLIAYKIAAHA
ADIAKGHPGAQIRDNALSKARFEFRWEDQYNLGLDPETARAYHDESLPQESAKVAHFCSM
CGPKFCSMKITQDVRDYAASLEADAKAQSFAAETDGALAPLSSIQQVKTGDSKLSHIAVK
TQEELTAAMAQKSAEFAASGAKLYLPLGEANTAKTANESAKYQDGSELKPTAQVAEV
NT seq
2154 nt
NT seq
+upstream
nt +downstream
nt
atgtccagtttagaatcgtcctcagaatcacttgccgtgaacactcatgggcaaacgaac
cgccgtgtggcgcgcgccgaggcgcaagcctttatcgatacccttaaaccattacaacat
cctaattcgcaaaaactttatttgcagggaagccgtgcggatttacgtgtggggatgcgg
caaattctgcaaaccgatacgcggattggcggcacggcgatcgcggccaacgttgagaaa
aatcctcccattccggtgtacgactgcgctggcccgtattccgatctggctgcgcaaatt
aatgtgcgccaaggactagccaaactcagattaccgtggattatcgagcgccaagatacc
gaagtactcgattgcgcgacctcagattttacccagcaacgcctaaaggatgatgggctc
gatcatctgcgtttcgaagcaggctcaagtgcgattgttcgtcctcgccgtgccttacct
ggtaaacgcgtgagccaactacactatgcccgccaagggatcattacccctgaaatggaa
tatgtggcgattcgggaaaatatggcgctcgcccaggtgcaagatgaaatcttaaaccgc
cgcggccatggtgaatcctttggtgccgtaataggtaaaccaattacccctgagtttgtc
cgcgacgaaattgcccgtggacgcgccattattccgttaaatatcaatcaccccgaagct
gagcctatgattattggccgtaactttttagtgaaagtgaacgccaatatcggtaactcg
gcggtcacgtcttccatcgaggaggaagtggaaaagcttgtttggtcaacccgttggggc
gcggacactgtgatggacttgtccactggccggtatatccatgaaacccgtgaatggatt
atccgcaactcgccagtgccgattggcacagtgccgatttatcaagcattggaaaaagtg
aatggcgttgctgagcaccttacctgggaagtgtttcgcgacactttgattgaacaagcg
gagcagggcgtcgattactttaccatccatgctggcgtgttattgcgctatgtgccgatg
accgccaagcgggtgacgggaattgtgtcccgcggtggctcgattatggccaaatggtgt
ttgagccatcatcaagaaaactttctttatacccattttcgtgagatttgcgagctatgt
gtcgcctacgatgtatcgctgtcattaggcgacggtatgcgacctggctccattgccgat
gccaatgatgaggcgcagttcgccgagcttgaaaccttaggtgagctagtcaaaatcgcc
tgggaatacgatgtgcagaccattatcgaagggcctgggcatatcccgatgcagctcatc
aaggagaatatggataagcagcttatccattgcgccgaggcgccgttttatactcttggg
ccgcaaattactgatattgcgccgggttacgatcattttacctccggaattggggcagcg
atgatcgcatggtatggctgcgccatgctctgctatgtgacgccgaaagagcacttaggt
ttacccaataagcaggacgtcaaacaaggactgattgcctacaagattgccgctcacgcg
gccgatattgccaaaggccacccgggcgcgcagatccgcgacaatgcgttatccaaggcg
cgttttgaattccgctgggaagatcaatataacctcggactcgaccctgagaccgcgcga
gcctatcacgatgaatccctgccacaagagtcggccaaggtcgcgcatttttgctctatg
tgtggccctaagttctgctcaatgaagatcacccaagatgtgcgcgactatgcggcaagc
cttgaagcggatgcaaaggcacaaagctttgctgctgagactgacggtgcgcttgcgcca
ttaagttccattcagcaggtgaaaacgggagattctaaattaagccatatcgctgtcaaa
acccaagaagagttaaccgccgccatggcgcaaaaatcggctgagtttgcggcctcgggc
gccaagttgtatctaccgctgggcgaggctaatacagctaaaactgccaatgaatcggcc
aagtatcaggatgggagtgagctcaaaccaacagcacaggttgcggaggtttga
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