Shewanella xiamenensis: MKD32_09725
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Entry
MKD32_09725 CDS
T08228
Symbol
cmoB
Name
(GenBank) tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB
KO
K15257
tRNA (mo5U34)-methyltransferase [EC:2.1.1.-]
Organism
sxm
Shewanella xiamenensis
Brite
KEGG Orthology (KO) [BR:
sxm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sxm03016
]
MKD32_09725 (cmoB)
Transfer RNA biogenesis [BR:
sxm03016
]
Prokaryotic type
tRNA modification factors
Methyltransferases
MKD32_09725 (cmoB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltransf_9
Methyltransf_25
Methyltransf_12
Methyltransf_23
Methyltransf_11
Methyltransf_31
CMAS
PrmA
PCMT
FtsJ
Motif
Other DBs
NCBI-ProteinID:
UML95539
LinkDB
All DBs
Position
complement(2211388..2212380)
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AA seq
330 aa
AA seq
DB search
MINFSSFYQQIADSNLQHWLETLPAILGKWQREHKHGNLPKWEKVLNKLHYPSPDKVDFV
DSVTIGTGEQLTPGEKEKLENLLRLFMPWRKGPFHIHGIHIDTEWRSDWKWDRVKPHISP
LQNRTVLDVGCGSGYHMWRMLGAGAKRVVGIDPSPLFLCQFEAVKRLSGENHPVHLLPLG
IEELPPLDAFDTVFSMGVLYHRRSPIDHLLQLRDQLRMGGELVLETLVIDGDENAVLVPQ
DRYGKMNNVWFIPSVAALMLWLKKCDFTDIRCVDTDVTALAEQRRTDWMPNESLVEYLDP
NDITKTIEGYPAPKRATIIAVKNQPNQDLN
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
gtgattaattttagctccttttatcaacaaatcgccgactcaaatttacaacattggctt
gaaaccttgccagcaatcctcggtaaatggcaaagagaacacaaacacggcaacctcccg
aaatgggaaaaagtgcttaataaactgcactatccaagcccagataaagtcgattttgtt
gatagtgtcacgataggcacgggtgagcagctcacgccaggcgaaaaggaaaaactcgag
aatttactgcggctctttatgccttggcgtaaaggtccattccatattcacggcattcat
atcgacaccgaatggcgcagcgattggaaatgggatcgggttaaaccgcatatttcgccc
ctgcaaaaccgtacagtactcgatgtaggttgcggtagcggctatcacatgtggcgtatg
ttaggggcaggcgctaagcgcgtggtaggcatcgacccttccccgctgtttttatgccaa
tttgaagcggttaaacgcttgagtggtgagaatcaccctgtgcacctgttgccacttggt
attgaagaacttccgccattggatgccttcgatacagtattctccatgggcgtcttgtat
cacagacgctcacccattgatcacttgttgcaattacgcgatcagttacgtatgggggga
gaattagtattagagacgttagtgattgatggtgatgaaaacgccgtactcgtcccgcaa
gataggtatggcaaaatgaataacgtttggtttattccatccgttgcggcactgatgctc
tggcttaaaaaatgtgatttcaccgacatacgttgtgtcgataccgatgtcaccgccctt
gccgagcagcgccgaaccgattggatgccaaatgaatcactggttgaatatcttgaccct
aacgatatcactaagactatcgagggttaccccgcaccgaaacgtgcaacgattattgca
gtgaaaaatcagccgaatcaagatttgaattaa
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