Shewanella xiamenensis: MKD32_09760
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Entry
MKD32_09760 CDS
T08228
Symbol
ruvB
Name
(GenBank) Holliday junction branch migration DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
sxm
Shewanella xiamenensis
Pathway
sxm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sxm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
MKD32_09760 (ruvB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sxm03400
]
MKD32_09760 (ruvB)
Enzymes [BR:
sxm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
MKD32_09760 (ruvB)
DNA repair and recombination proteins [BR:
sxm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
MKD32_09760 (ruvB)
RecFOR pathway proteins
MKD32_09760 (ruvB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
AAA_16
TIP49
AAA_3
AAA_22
AAA_14
nSTAND3
Mg_chelatase
RNA_helicase
Bac_DnaA
NB-ARC
AAA_17
Rad17
AAA_24
AAA_18
DUF815
NTPase_1
TsaE
AAA_25
NPHP3_N
IstB_IS21
NACHT
AAA_11
ATPase_2
AAA_28
Motif
Other DBs
NCBI-ProteinID:
UML95546
LinkDB
All DBs
Position
2220443..2221447
Genome browser
AA seq
334 aa
AA seq
DB search
MIEADRLIQPQLQGQDDVIDRAMRPKLLDEYTGQDDTRAQLKVFIQAAKNREEALDHMLI
YGPPGLGKTTLAMIVANEMGVNIKSTSGPVLEKAGDLAALLTNLEAGDVLFIDEIHRLSP
VVEEILYPAMEDYQLDIMIGEGPAARSIKLDLPPFTLVGATTRAGALTSPLRARFGIPLR
LEFYNVKDLSTIVTRSAQVMGLAIDSEGATEIAKRSRGTPRIANRLLRRVRDYAEVQHDG
AVTQHVAELALNLLDVDGEGFDYMDRKLLLAIIDKFMGGPVGLDNLAAAIGEERETIEDV
LEPFLIQQGFIQRTPRGRIATARAYLHFGMIKPE
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atgattgaagcagatagactgatacagccacagctgcaaggtcaagatgatgttatcgat
agggcaatgcgccctaaattgctcgatgaatacactgggcaggatgatacgcgtgcccaa
ttaaaagtgtttattcaagcggcgaagaatcgcgaagaagctttagatcatatgttgatc
tacggtccgccaggtttaggtaaaaccaccttggcgatgattgtcgccaatgaaatgggc
gtcaatatcaaatcgacctcgggtcccgtgttggaaaaagcaggggatttagcggcgctg
ctgactaacctcgaagcgggtgatgtacttttcatcgatgaaatccatcgattaagtcca
gtggttgaggagatcttgtatccggcgatggaagactatcaactggatatcatgattggt
gaaggacctgcggcgcgttccattaagctcgatttaccaccttttactttagtcggcgcg
accacgcgggcgggggccttaacctctccgctaagggcgcgttttggcattccattgcga
cttgagttttataatgtcaaagatttaagcaccattgtgacccgttctgcccaagtgatg
ggattagccattgatagtgagggcgcaactgaaattgccaaacgttcgcgcggtacacca
aggattgctaatcgattactccggcgggtgcgtgattatgccgaagtgcaacacgatggt
gctgtgactcaacatgttgctgagctggcgctcaatttactcgatgtcgatggcgaaggc
ttcgattatatggaccgcaaattgttgctcgcgattatcgataagtttatgggcggccca
gtgggccttgataaccttgcggcagcaattggtgaggagcgcgaaaccattgaagatgtg
ctcgaacctttccttattcaacaaggttttatccaacgcactccccgtggcaggatcgca
acggccagagcgtatttacactttggaatgataaaaccagagtga
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