Shewanella xiamenensis: MKD32_11535
Help
Entry
MKD32_11535 CDS
T08228
Symbol
holB
Name
(GenBank) DNA polymerase III subunit delta'
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
sxm
Shewanella xiamenensis
Pathway
sxm03030
DNA replication
sxm03430
Mismatch repair
sxm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sxm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MKD32_11535 (holB)
03430 Mismatch repair
MKD32_11535 (holB)
03440 Homologous recombination
MKD32_11535 (holB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sxm03032
]
MKD32_11535 (holB)
03400 DNA repair and recombination proteins [BR:
sxm03400
]
MKD32_11535 (holB)
Enzymes [BR:
sxm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
MKD32_11535 (holB)
DNA replication proteins [BR:
sxm03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
MKD32_11535 (holB)
DNA repair and recombination proteins [BR:
sxm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
MKD32_11535 (holB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
Motif
Other DBs
NCBI-ProteinID:
UML92095
LinkDB
All DBs
Position
complement(2624696..2625652)
Genome browser
AA seq
318 aa
AA seq
DB search
MVTQSGFDVLTLPWLDAPRQAFLTQLQTQKVPHAQLVGIDSAYGGELLSVFMARAAMCSQ
PTPAGGCGFCKSCQLFDAGNHPDFYQIEADGHQIKVDQIRELCSRLSATAQQSGRRVAII
HHSERLNSASANALLKTLEEPGKDTLLLLHSDTPARLMATISSRCQRLPFVTPSKMLIKN
WLIQQCQIQEDVTWCLSVVGGPLKLAESLLSDGTQPSRYQTLLGFRKDWAQSLSSGHLCA
SLLTISEQQIIDALKVLYLLLRQVLLKYGDQDAFVQAQIGNLAAKIMGMCHSLSAMPSVN
YLGLCQSYVLEYKEITNK
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atggtaacgcaaagcggatttgatgtattaaccctgccttggctcgatgcgccaaggcag
gcgtttttaacccagttgcaaactcaaaaagtcccccacgcgcaactcgtgggtatcgat
tctgcctatggcggtgaacttttgagtgtatttatggcgcgcgccgccatgtgttcacaa
cccactcccgcgggcgggtgcggtttttgtaagtcctgccagttatttgatgcgggtaat
catcctgatttttatcaaatcgaggccgatggccatcaaatcaaagtcgatcaaattcgt
gagctttgtagccgcttaagtgcgactgcccagcaaagtggccgccgtgtagccattatc
caccatagcgagcgtttaaactcagcctctgccaatgcgctactcaagacgctcgaagag
ccgggtaaagacaccttactactattacattccgatacgcccgcacgtttaatggctacg
atcagtagtcgttgtcagcggcttccctttgtgacgccgtctaaaatgttgatcaaaaac
tggttaattcagcaatgtcagatccaagaggatgtgacttggtgcttgagtgtggtcggc
ggtccattaaagttggccgaaagtttgctatccgacggtacgcaacccagtcgttatcaa
accttgttagggtttcgcaaagattgggcgcaaagtttgtcgtcgggccatctgtgtgct
agtttgttaacgataagtgaacaacaaatcattgatgctcttaaggttttatacttactc
ctgagacaagttttattgaagtacggcgaccaagatgcgtttgtgcaagcgcaaataggg
aacttggcggcgaaaatcatgggaatgtgtcatagcttaagtgcaatgccgagtgtcaat
tatttaggcttgtgtcaaagttatgtcttagaatataaagaaataacaaataagtaa
DBGET
integrated database retrieval system
