Shewanella xiamenensis: MKD32_12365
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Entry
MKD32_12365 CDS
T08228
Name
(GenBank) efflux RND transporter permease subunit
KO
K03296
hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family
Organism
sxm
Shewanella xiamenensis
Brite
KEGG Orthology (KO) [BR:
sxm00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99977 Transport
MKD32_12365
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Gene cluster
GFIT
Motif
Pfam:
ACR_tran
SecD_SecF_C
MMPL
DUF2207_C
Motif
Other DBs
NCBI-ProteinID:
UML92249
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Position
2790043..2793108
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AA seq
1021 aa
AA seq
DB search
MNLTHLAIKRPVTTSMFFFAILLFGLASSRLLPLEMFPGIDIPQIVVQVPYKGSTPAEVE
RDITKVLEESLATMGGIDELESESSQEGAEIEINMKWGENVATKSLEAREKIDAVRHLLP
KDVERVFIRQFSTADMPVLTIRISSDRELSGAFDLLDKQLKRPLERVEGVSKVSLYGVEQ
KQIEVRINANRLAASGFSATELQARLGRENFVLSAGTLRESNLVYQVSPKGEFRNLEDIK
ALVLIPGLTLGDVADVQFSLPERSEGRHLDQHYAVGLDVFKASGANLVDVSDRVLKVIEQ
AKQDQQFQGIRLFIMEDQASGVKSSLSDLLLSGLIGALLSFVVLYLFLRNLKMTLIVVSS
VPISIGMTLAAMYLLGYSLNILSMMGLLLAVGMLIDNAVVVTESVLQEKQGNSLKTSTQD
NENAVMTGVDKVSLAVLAGTMTTAIVFLPNIFGVKVQLTIFLEHVAIAICISLAASLLVA
KTLIPLMLTKFHFEIAPEKSAGKLQSFYNRSLNWVLLRPWRSGLIAIAILASTALPLSMV
KQDQEDSQSKERIYINYQVEGRHNLNVTEAMVGQMEEYLYKNKEKFHIDSVYSYYAPDEA
SSVILLKKDLPMSLDELKKNIRSGFPKYSIAKPQFGWGDDNSGVRVTLTGRSTSELIYLS
EQVLPLLSTIKGLVDVRSEVNGAQQEVVIRINRQMAARLDLKLNEVASSISMALRGTPLR
SFRHDPNGELRIEMAYEKEWQKSLDKLKQLPVVRIDQRLYTLDNLASIEIQPRFDTIKHY
NRQTSLSIGANLDNLTTEEAQTKIKQVMENVRFPDGYNYSLRGGFERQDEDQSIMAINML
LAIAMIYIVMAALFESLLLPTAIITSILFSITGVFWALLLTGTPMSVMAMIGILILMGIV
VNNGIVLVDQINQMTPDLDKLSDTIREVCITRLRPVLMTVGTTVLGLVPLAMGDTQIGGG
GPPYYPMAIAIIGGLSFSTVTSLYLVPLCYQLLYRMRYRAAVRLGESNRIAQKLLPWTAK
A
NT seq
3066 nt
NT seq
+upstream
nt +downstream
nt
atgaacctcacccatctagcgataaagcgccctgtcaccaccagcatgtttttctttgct
atcttgctgtttggtctggcttctagccgtctattaccgctcgaaatgttccccggtatc
gatattccgcagattgtcgtgcaagtgccttacaaaggctcgactcctgcagaagtggaa
cgcgatatcactaaggtgctcgaagagtcgctcgccaccatgggcggtatcgatgaactt
gaatcagagtcctcccaagagggcgctgaaattgaaatcaatatgaaatggggcgaaaac
gttgccacaaaaagcttagaagcacgcgaaaaaatcgatgccgtgcggcatttattgccc
aaggatgttgagcgggtatttatccgccaattttccactgccgatatgcctgtactcact
atacgcatttcgagcgaccgcgagctctctggtgcattcgatttactcgataagcagcta
aaacgaccattagagcgggtggagggcgtctctaaggtgagtctctatggggttgaacaa
aagcagattgaagtgcggatcaatgcaaatagactcgccgccagcggtttttcagcgact
gaattacaagctcgtctcgggcgcgaaaacttcgtgttaagtgctggcaccttgagagaa
agtaacctcgtttatcaagtctcccctaagggggaatttagaaaccttgaggatattaag
gcgctggtgttaatccctggactgaccttaggcgatgttgccgatgtgcaattttccctg
cctgagcgcagtgaaggtcgtcatttagatcaacactatgcggtgggtttagatgtattt
aaagcctccggcgccaatttggtggatgtgtccgaccgcgtacttaaagtcattgagcag
gctaaacaagaccaacaatttcaaggtatccgtttgtttattatggaagatcaagcctca
ggcgtgaaatcctctttatcggatctactgctgtcgggattgatcggtgcgttgttatca
tttgtcgtgctttatctgttcctaagaaacctcaagatgaccctaattgtggtgtcctca
gtaccaatttctatcggtatgacgttagccgccatgtatctgctcggttacagcttgaat
attctatcgatgatgggcttgttattggctgtaggtatgcttatcgataacgccgttgtg
gtcaccgaaagtgtactgcaagaaaaacaaggtaactcactcaaaaccagtacccaagac
aatgaaaacgctgttatgacgggagtcgataaggtgagtcttgctgtactggcgggtact
atgactacagcgattgtgtttttacccaatatttttggggtaaaagttcagctgactatt
ttccttgagcatgtagcaattgcgatttgtatttcgctggcagcatcacttttggtggct
aaaacattaattccattgatgttgactaagttccactttgagattgcaccagagaaatct
gcgggtaaattgcaaagtttctacaatcgcagtcttaattgggtgcttctcagaccttgg
cgttcagggctgatcgccatcgcgattctcgcatctaccgccctgcccttgtcaatggtc
aagcaggatcaagaggacagtcaaagtaaagagcgaatttacattaactaccaagttgaa
gggcgccataatctcaacgtgaccgaagcgatggtgggtcaaatggaggagtatctttat
aaaaataaagaaaaattccatattgactctgtgtatagctactatgctcccgacgaagcc
tcatcggtcatcttattgaaaaaagatctgcccatgtcccttgatgaactgaagaagaat
attcgcagtggctttcctaagtactccatcgctaaacctcagtttggctggggtgacgat
aattcgggtgtacgcgtcaccctcactggacgctccacctcagagcttatctatttgagt
gagcaagtgttgccattactctcgacgatcaaaggcttagtggatgtacgttctgaagtc
aacggtgctcagcaggaagtggttatccgtattaatcggcaaatggcggcaagactggat
ttaaaactgaacgaagtagcttccagcatttcaatggcactaagagggacaccactgcgc
tcatttaggcacgatccaaacggggaactacgtatcgaaatggcctatgagaaggaatgg
caaaaatccctcgataagcttaagcaattgccggtagtgcgaatcgatcaacgcctttac
acacttgataaccttgccagtatcgaaatccaacctagattcgataccatcaagcactat
aatcgccaaacttcgctgtctatcggagcgaacttggataatctcaccacagaggaagcc
caaactaagatcaaacaagtgatggagaatgtgcgttttcctgatggctataactattcg
ctacggggcggttttgaacgccaagatgaagaccaaagtatcatggcaatcaatatgtta
cttgctatcgctatgatttacatcgtgatggcggcactatttgagtccttgttattaccg
acggccattattacctcaatcctcttctcgataaccggggtgttttgggcgttgctgctc
acaggcacgcctatgtcggtcatggcgatgatcggtatcctgattttaatgggcatcgtg
gtaaataacggtatcgtcttggtcgatcaaatcaaccaaatgacacccgatctcgataag
ctgtcggacaccattcgcgaagtgtgtattacccgtttgcgcccggtactgatgacagta
ggaacaaccgtactaggtttagtgccactggcgatgggcgatacccaaattggtggcggc
ggcccgccatattatccgatggcaattgccattattggcggcttgtctttctcaaccgta
actagcctatatttggtgccattgtgttatcaactcctctatagaatgcgttaccgcgcc
gcagtccgacttggcgaatcgaatcgtatcgcccaaaaactcttaccgtggacagccaaa
gcatga
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