Shewanella xiamenensis: MKD32_12915
Help
Entry
MKD32_12915 CDS
T08228
Symbol
pspF
Name
(GenBank) phage shock protein operon transcriptional activator
KO
K03974
psp operon transcriptional activator
Organism
sxm
Shewanella xiamenensis
Brite
KEGG Orthology (KO) [BR:
sxm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sxm03000
]
MKD32_12915 (pspF)
Transcription factors [BR:
sxm03000
]
Prokaryotic type
Other transcription factors
Others
MKD32_12915 (pspF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
HTH_8
AAA_5
Mg_chelatase
AAA_2
AAA
HTH_28
bpMoxR
HTH_Tnp_ISL3
AAA_16
HTH_23
AAA_7
nSTAND3
AAA_22
Motif
Other DBs
NCBI-ProteinID:
UML92345
LinkDB
All DBs
Position
2905005..2906096
Genome browser
AA seq
363 aa
AA seq
DB search
MDNKFQQDNLIGQSNALLEVLEHVSQIAPLSKPVLIIGERGTGKELIAERLHYLSKRWDQ
NFIKLNCSSLSENLLESELFGHESGAFTGAKGKHEGRFERADGGTLFLDELANTSGLIQE
KLLRVIEYGEFERVGGNKTIQADVRLICAANEDLPSLAEAGEFRADLLDRLAFDVITLPP
LRCRPEDIMTLAEYFAVGMARQLKLELFSGFSANAIEQLMSHDWPGNIRELKNVVERSVY
RNCGENRPIEHIILDPFASPYRPTTRVRTLERQVVPTPHSTIISPPTVTAKTDIDVIAPS
EAPLNDFSFPLDFKEQTERYEMELIQQALSASQYNQKKTAEILGLSYHQLRGILKKYNLL
DKA
NT seq
1092 nt
NT seq
+upstream
nt +downstream
nt
gtggataataaatttcagcaagacaatctaatcggtcaatcaaacgccctacttgaagta
ttagagcacgtctcacaaatcgctccgttatcaaaacctgtactgatcattggtgaacga
ggcacaggtaaagagctgattgccgaacgcctacattatctgtctaagcgctgggatcaa
aattttattaagctaaattgttcatctttgagcgaaaacttgcttgaaagtgaattgttt
ggccacgaatctggggcctttactggtgccaaaggtaaacacgaaggccgttttgaacgg
gctgatggtggaacactgtttcttgacgagttagccaatacctctggattgattcaagaa
aaactactgcgtgttatcgagtacggtgaatttgaacgtgtcggtggcaataaaaccatt
caagcggatgtgcgccttatctgcgccgccaacgaagatttaccctcactggccgaggcc
ggtgaatttcgggccgacttactcgatcgtttagccttcgatgtgatcacactgccgcca
ctacgttgtcgtccagaagatatcatgacattagccgaatactttgctgtgggaatggct
cggcaactcaagctcgaactctttagtggctttagtgcaaatgccatcgagcagctcatg
agtcatgactggcccggtaatattcgtgaacttaaaaacgtagttgagcgaagtgtttac
cgtaattgcggtgaaaatcgtcccatcgagcacattattctcgaccctttcgcctccccg
taccggccgacaactcgggtgcgcactcttgagcgtcaggtggtgcccacaccgcactca
accatcataagccctcccaccgttacggcaaaaaccgatattgatgttattgcacctagt
gaagcgccgttaaatgactttagttttccattagactttaaagaacaaaccgagcgttat
gagatggagcttattcagcaagccttatcggcgagccaatataatcaaaagaagaccgct
gaaatcttggggttaagttatcatcagctacgtggcattctaaaaaaatacaatttgctc
gataaagcataa
DBGET
integrated database retrieval system
