Shewanella xiamenensis: MKD32_13085
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Entry
MKD32_13085 CDS
T08228
Name
(GenBank) helix-turn-helix domain-containing protein
KO
K02647
carbohydrate diacid regulator
Organism
sxm
Shewanella xiamenensis
Brite
KEGG Orthology (KO) [BR:
sxm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sxm03000
]
MKD32_13085
Transcription factors [BR:
sxm03000
]
Prokaryotic type
Helix-turn-helix
Other families
MKD32_13085
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Diacid_rec
HTH_30
GGDEF_2
HTH_8
GAF_2
GAF
Calci_bind_CcbP
Motif
Other DBs
NCBI-ProteinID:
UML92374
LinkDB
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Position
2947289..2948521
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AA seq
410 aa
AA seq
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MYLLDSAIAKKIVSRTMKIIGHNINVMNGQGVILGSGDPKRMGSVHEGALLAIAQNRNVE
LSEEVASGLHGVKPGINLPLHYQGQIIGVIGITGDPAELTHYGELLKMTAEMIVEQANQQ
DKLQWENRQREEFILQLIKAQTDDDEQLHRWAKQLDIDITLPRVAAIIEVSEKQPSAIHK
MISQVNTSTDNELSGGDERNPRVSETLKQVLHLLQNPDRGNLIAMTSMSQLVILKPAFLD
GKQWDPELENQRIDKLLQRLPAQMDLNFKIALGHFFPVKGGIARSYQTAQETLSLGKQLN
PEGTKYLFEDYSLQVLLSGLKHDWRGQALASPYQQLTEADKNGQLRKTLAAYITHFGDAQ
RCANALFIHRNTLRYRLDKIQQLTKTDIQSLHGLLSLYLGQLLDTSASPK
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
atgtatctgctcgattccgccatagccaaaaaaattgtcagtcgtacgatgaaaatcatc
ggacacaatatcaatgtgatgaatggtcagggggtgattttaggatcaggcgatcccaaa
cgaatgggttcagtccacgaaggcgcattattagccatagcgcaaaatcgcaatgtggaa
ttgagcgaagaagtcgcctccggtcttcatggcgtaaaaccaggcatcaacttacctttg
cattaccaagggcaaattattggtgtgattggcattactggcgacccggcagaactaacc
cactacggcgagctgctaaaaatgaccgccgagatgattgtcgagcaagccaatcaacag
gataaattgcaatgggaaaaccgccagcgtgaagaatttattctgcaacttatcaaggca
caaaccgatgacgatgagcaattgcatcgctgggccaagcagctcgatattgatatcacg
ctaccacgagtggccgccattattgaagtcagtgaaaaacaaccctccgccatccacaaa
atgatatcgcaggtaaacacatcaacagataacgagctaagcggtggtgatgagcgcaat
cccagagtcagcgaaaccctcaagcaagtattgcatctactgcaaaatcccgaccgcggc
aacctaattgctatgacctccatgtcacagctggtgatcctaaaacccgcttttctagat
ggaaaacaatgggatcccgagcttgaaaaccaacgtattgataagttattgcaacgatta
cctgcgcagatggacttaaattttaaaattgccttgggccacttttttcccgtaaaaggt
gggattgcacgctcctatcaaaccgcgcaagaaacgttgagcttaggtaaacagctcaac
cctgaaggcacaaaatacctatttgaggattattctttacaagtgctgctctcaggactc
aagcatgactggcgcggccaagcgctagcaagtccctatcagcaactaacggaggccgat
aaaaatggccaattacgtaaaactttagctgcctacatcacccactttggtgatgcgcag
cgatgcgccaatgccctgtttatccaccgaaataccttaagatatcgtctagataaaatt
cagcaattaaccaaaactgatattcaatccttacacggcttattaagtctgtatctggga
caactgcttgatacttctgcaagcccaaagtag
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