Shewanella xiamenensis: MKD32_14840
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Entry
MKD32_14840 CDS
T08228
Symbol
rnc
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
sxm
Shewanella xiamenensis
Pathway
sxm03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
sxm00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
MKD32_14840 (rnc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sxm03019
]
MKD32_14840 (rnc)
03009 Ribosome biogenesis [BR:
sxm03009
]
MKD32_14840 (rnc)
03036 Chromosome and associated proteins [BR:
sxm03036
]
MKD32_14840 (rnc)
Enzymes [BR:
sxm01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
MKD32_14840 (rnc)
Messenger RNA biogenesis [BR:
sxm03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
MKD32_14840 (rnc)
Ribosome biogenesis [BR:
sxm03009
]
Eukaryotic type
90S particles
RNase
MKD32_14840 (rnc)
Prokaryotic type
rRNA processing factors
MKD32_14840 (rnc)
Chromosome and associated proteins [BR:
sxm03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
MKD32_14840 (rnc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
RM44_endonuclase
DND1_DSRM
DSRM_2
Motif
Other DBs
NCBI-ProteinID:
UML92706
LinkDB
All DBs
Position
complement(3371264..3371944)
Genome browser
AA seq
226 aa
AA seq
DB search
MEPIKNLPRLCRTLGYEFKNIDLLTQALTHRSAANKHNERLEFLGDSILSIVISDALYHQ
FPKATEGDLSRMRATLVRGDTLTLIAQAFKLGDYLFLGPGELKSGGFRRESILADAVEAI
IGAIYLDSDLEVCRELLLKWYAERLSEIQPGVNQKDAKTLLQEYLQGLKKPLPDYQVINI
EGDAHDQTFTVECRIDDLSESVIGVASSRRKAEQIAAAQVLELLKK
NT seq
681 nt
NT seq
+upstream
nt +downstream
nt
atggaaccgattaaaaatttgccgcgtttgtgtcgtacattgggctatgagttcaagaat
attgaccttctaacccaagcgttgactcatagaagtgcggcaaataagcacaatgagcgt
ttagaatttttaggtgattcgattttatcgatagtcatttcggatgccttatatcatcag
tttcctaaggcgactgagggcgatttaagccggatgcgcgccactttagtgcgtggcgat
acgctgaccttgattgctcaagcctttaaacttggggattatttattcctcggtcctggc
gaattaaagagtggcggttttcgacgcgagtcgattctggccgatgcggttgaggcgatt
attggtgcgatttacttagattcggacctcgaagtgtgccgtgagctgttgcttaaatgg
tatgccgagcgtttatctgagattcaacccggtgtgaatcaaaaagacgctaaaacctta
ctgcaagaatatttacaagggttaaagaagccgctacccgattaccaagtaatcaacata
gaaggcgatgcccacgatcaaacattcaccgttgaatgtcgtatagatgacttgagcgaa
agcgtgattggcgttgcgagctcacgccgcaaagccgagcagattgccgcggctcaagta
ttggagttactgaagaaatga
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