Shewanella xiamenensis: MKD32_15585
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Entry
MKD32_15585 CDS
T08228
Symbol
miaB
Name
(GenBank) tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
sxm
Shewanella xiamenensis
Brite
KEGG Orthology (KO) [BR:
sxm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sxm03016
]
MKD32_15585 (miaB)
Enzymes [BR:
sxm01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
MKD32_15585 (miaB)
Transfer RNA biogenesis [BR:
sxm03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
MKD32_15585 (miaB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
Fe-ADH
B12-binding
LuxC
Motif
Other DBs
NCBI-ProteinID:
UML92840
LinkDB
All DBs
Position
3535991..3537415
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AA seq
474 aa
AA seq
DB search
MSKKLHIKTWGCQMNEYDSSKMADLLGEYQGYTLTEEAEEADILLLNTCSIREKAQEKVF
HQLGRWKTLKDKNPDLIIGVGGCVASQEGKAIKDRAHCVDIIFGPQTLHRLPEMIEQVRR
GDKAVIDVSFPEIEKFDRLPEPRAEGPTAFVSIMEGCSKYCSFCVVPYTRGEEVSRPSDD
IILEIAQLAEQGVREVNLLGQNVNAYRGATHDGGICTFAELLRYVAAIDGIDRIRFTTSH
PIEFTQDIIDVYEDTPELVSFLHLPVQSGSDRILTAMKRGHMAIEYKSIIRRLRKARPDI
QISSDFIIGFPGETKEDFADTMKLIEDVGFDHSFSFIYSARPGTPAADLPDDVDMEEKKQ
RLAILQDRITQQAMRYSRHMMGTVQRILVEGPSVKNPMELRGRTENNRVVNFEGLPKHIG
TFVDVEIADVYTNSLRGKFIRGEDEMDLRRNLRPSDILAKHKQDDDLGVTQFKP
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaaaaactccatattaaaacttggggctgtcaaatgaatgagtacgactcatct
aagatggcggatcttttaggcgaataccaaggttacaccttaactgaagaagcagaagaa
gcagatattctgctgctgaacacttgttctatccgtgaaaaagcacaggaaaaagtgttc
catcagttaggtcgttggaaaacactcaaagataaaaatcctgacctgattattggtgtg
ggtggctgtgttgcatctcaagaaggtaaagcgattaaagaccgagctcattgtgttgac
atcatctttggcccacagacgcttcaccgtctaccggagatgatcgaacaagtacgccgc
ggcgataaagctgtgatcgacgtgagttttcctgagatcgaaaaatttgaccgtcttccc
gaaccacgcgccgaaggcccaacggcgtttgtgtcaattatggaaggttgtagcaaatac
tgttcattctgcgtggtaccttatacccgtggtgaagaagtcagccgcccatcggacgac
atcattcttgaaattgcccaactggcagaacaaggtgtgcgcgaagtcaatctgctcggt
caaaacgtcaatgcttaccgtggcgcaacccacgatggcgggatctgtacctttgccgag
ctattacgctatgttgccgctattgacggcatcgaccgtattcgcttcaccaccagtcac
ccgattgaatttacccaggatatcatcgacgtttacgaagatacgcctgaattagtcagc
ttcctgcacttacccgtgcagtcaggttctgaccgcattctcaccgcaatgaaacgtggc
catatggcgattgagtacaaatctatcatccgccgcctgcgtaaagctcgtccagatatc
caaatcagctccgactttatcattggtttccctggtgaaactaaagaagacttcgccgat
accatgaagctgattgaagatgtaggttttgaccacagctttagctttatctacagcgcg
cgcccaggcacgcctgcggcagacttacctgacgacgttgatatggaagagaaaaaacaa
cgtctggccattctacaagaccgtatcactcaacaggccatgcgttacagccgccatatg
atgggtacagtgcaacgcattctggttgaaggcccctcggtgaaaaacccgatggaactg
cgcggtcgcaccgaaaacaaccgtgtggtgaactttgaaggcttaccaaaacacattggt
acctttgtggatgtcgagattgccgacgtttacactaactcactacgcggtaaatttatc
cgcggtgaagatgaaatggatctgcgccgtaacctgcgcccatcggatattctagcgaag
cataagcaagatgatgatctcggtgtcactcaatttaaaccttaa
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