Shewanella xiamenensis: MKD32_16015
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Entry
MKD32_16015 CDS
T08228
Name
(GenBank) 23S rRNA pseudouridine(2604) synthase RluF
KO
K06183
16S rRNA pseudouridine516 synthase [EC:
5.4.99.19
]
Organism
sxm
Shewanella xiamenensis
Brite
KEGG Orthology (KO) [BR:
sxm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sxm03009
]
MKD32_16015
Enzymes [BR:
sxm01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.19 16S rRNA pseudouridine516 synthase
MKD32_16015
Ribosome biogenesis [BR:
sxm03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
MKD32_16015
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
UML92917
LinkDB
All DBs
Position
3636286..3637050
Genome browser
AA seq
254 aa
AA seq
DB search
MRLAKYLAQCGISSRREACRLIEAGRITRNGKIATHHDPVQLDADGQCLDSICLDAKPVL
GSETPTYWLFNKAVGTDCRLLKDDKSSLIHLLPPTPRLYPVGRLDKDSRGLLLLTNDGEL
THKLMHPSFAHSKTYHVQLERAFTDEFIKLMASGVKYKEVDTLPCKVRRLSEDKFEIVLI
QGLNRQIRRMSSALGYKVIDLQRVALMTLSLETVSEDNCTESKAATNTLNTLPEGEMRPL
TPTEITTLKAALAI
NT seq
765 nt
NT seq
+upstream
nt +downstream
nt
atgcgtctagctaaataccttgcccaatgtggcatcagttcacgccgagaggcctgccgc
ttaatcgaggctggacgcattacgcgaaatggtaagattgccacacatcacgacccagtc
cagctcgatgcagatggtcaatgccttgatagtatttgcttggatgcaaaacctgtatta
ggcagcgaaactcctacctattggctattcaataaggccgtaggtacagattgccgttta
ctcaaagacgataaatccagcttgatccacttactgccgccaacaccaagactctacccc
gtcggcagattagataaggattcccgcggattattgctgctcactaacgatggcgaactc
acccacaaactgatgcaccccagttttgcccacagtaaaacctaccatgtgcagctagag
agggccttcaccgatgagtttattaagctaatggccagcggcgtaaagtacaaagaagta
gatactctcccctgtaaagttcgtaggcttagtgaagataaatttgaaatagtgctgatc
caaggcttaaatcggcaaattcggcggatgtccagcgccttaggttataaggttatcgat
ttacagcgagtggccttaatgacactcagccttgaaacagtaagcgaagataattgtaca
gaaagcaaagcagcaacaaacacactaaacactctaccagagggagaaatgcgaccgcta
acacccactgaaattacaacgctaaaagccgcactagcgatatag
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