Shewanella xiamenensis: MKD32_16050
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Entry
MKD32_16050 CDS
T08228
Name
(GenBank) long-chain fatty acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
sxm
Shewanella xiamenensis
Pathway
sxm00061
Fatty acid biosynthesis
sxm00071
Fatty acid degradation
sxm01100
Metabolic pathways
sxm01212
Fatty acid metabolism
sxm02024
Quorum sensing
sxm04146
Peroxisome
Module
sxm_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
sxm00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
MKD32_16050
00071 Fatty acid degradation
MKD32_16050
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
MKD32_16050
09145 Cellular community - prokaryotes
02024 Quorum sensing
MKD32_16050
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
sxm01004
]
MKD32_16050
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sxm04147
]
MKD32_16050
Enzymes [BR:
sxm01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
MKD32_16050
Lipid biosynthesis proteins [BR:
sxm01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
MKD32_16050
Exosome [BR:
sxm04147
]
Exosomal proteins
Exosomal proteins of breast milk
MKD32_16050
Exosomal proteins of breast cancer cells
MKD32_16050
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-ProteinID:
UML92924
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All DBs
Position
3644640..3646244
Genome browser
AA seq
534 aa
AA seq
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MAYDQESQLELGKYSSLIDLIERTSQRFGDKTAYACLGKSSSFNEIERDSRYFAAYLQNN
TNLKPGDRIAIQLPNITQFVIAAYGALRAGLILVNTNPLYTERELIHQFNDSGAKALVVL
SDLLPTLAKVVATTPIELVISTHPLDLIDPQVQPKTGLKNVEFCHVLKQGAELPFTRFVP
ALGDLAALQYTGGTTGLSKGAMLTHGNMLANAAQVKSRIGSVITEGEDIFVAPLPIYHIY
AFMVNLVLYFECGGCSVLIPNPRDINGLIKTLAKYPFTGFAGLNTLFVALCHQPEFKALD
FSHLKITISGGTALTAAAANLWQQTTGNTISEGYGLSETSPVISLNAPGYQKIGTIGKPV
LGTEVKLLDENGNEVAQGEAGELAARGPQVMLGYWNNPQETANVMTADGFFKTGDIAILN
EEGFHQIVDRKKDMIIVSGFNVYPNEVENVLASHPNIIECAVVGVKDEHSGEAVKACIVL
KDDSQDPELMKTTIINFCREQLTAYKLPKLIEFMPQLPKSTVGKILRRELKNQP
NT seq
1605 nt
NT seq
+upstream
nt +downstream
nt
atggcatacgatcaagagtcacaactcgaacttggcaaatactcttcactcatagactta
atcgaacgcactagccaacgctttggcgataaaaccgcatatgcttgcttaggtaaaagc
agtagcttcaatgagatagaacgcgattcacgctattttgccgcctatttgcagaataac
actaacctaaaacctggcgatcggatcgcgattcaattacccaatattacccaattcgtc
atcgccgcctatggtgcactacgagcaggcctgattctcgtcaacactaacccgctttat
actgaacgtgagcttatccatcagtttaatgactcaggcgctaaggccttagtggtattg
tcagatctgttgccaaccctcgccaaagtggttgcaaccacaccaattgaattggtgatt
tcgacccacccgttagatcttatcgatccacaagttcagcccaaaacggggcttaaaaat
gtcgaattctgtcacgtattaaaacaaggtgcagagttaccatttacgcgctttgtgccc
gccttaggcgatttagccgcgctgcaatataccggtggtacaacgggcctctccaaggga
gccatgctgacccacggcaatatgctcgccaatgcggcgcaggtaaaatcccgcatcggc
agtgttatcaccgaaggggaagatatttttgtcgcgccactgccgatttaccatatctac
gcctttatggtgaacttggtgctgtattttgaatgtggtggttgctcggtattaatccca
aatccccgtgatattaatggcttaatcaagacgctggcgaaataccccttcaccggtttt
gcagggcttaacaccttatttgtcgccttgtgtcatcaacctgaatttaaagcgctggat
ttcagtcatttaaaaatcactatttctggcggtacagcgctgaccgctgccgcagccaat
ctatggcagcaaaccacaggcaataccatcagtgaaggttatggcttatccgagacctcg
ccagtgatctcgctcaatgcaccgggatatcaaaagattggcactatcggtaagcccgtt
ctcggcactgaggtcaaactgttagacgaaaacggtaatgaagtcgcgcaaggggaagcc
ggtgagctcgccgcccgtggcccacaggtgatgctaggttattggaataatccccaagaa
acggctaatgtgatgacggctgatggtttctttaaaacgggggatattgcgattctgaac
gaggaaggcttccatcaaatcgttgatcgcaaaaaggatatgattattgtctctggcttt
aacgtctatcctaatgaagtcgaaaacgtgcttgctagccacccaaatatcatcgaatgc
gccgtagttggcgtaaaggatgagcactctggagaagcagtcaaagcctgtatcgtgctc
aaggatgacagccaagaccctgaactgatgaaaaccaccatcatcaacttctgccgcgag
caactcactgcctacaagctacctaagttgattgaatttatgccgcagctacctaagagt
accgtgggtaaaattctgcgcagagagcttaaaaatcagccttaa
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