Shewanella xiamenensis: MKD32_17050
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Entry
MKD32_17050 CDS
T08228
Symbol
ygfZ
Name
(GenBank) tRNA-modifying protein YgfZ
KO
K06980
tRNA-modifying protein YgfZ
Organism
sxm
Shewanella xiamenensis
Brite
KEGG Orthology (KO) [BR:
sxm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sxm03016
]
MKD32_17050 (ygfZ)
Transfer RNA biogenesis [BR:
sxm03016
]
Prokaryotic type
tRNA modification factors
Thiolation factors
MKD32_17050 (ygfZ)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
YgfZ_barrel
GCV_T
Motif
Other DBs
NCBI-ProteinID:
UML93114
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All DBs
Position
3877369..3878322
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AA seq
317 aa
AA seq
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MTIAVSTPNWDLDASTPPLMLANLSHLGLIKVVGEQGRSFIHGQVTTDISSLETNQWRWG
AHCDPKGKMLASFRTFAIQDALLMLMPKDTIAVDLPQLQKYAVFSKATLTNASDEWTLLG
VAGEQAKQFVSQHYGEVTQELTLIEHGAILKDADRFILVLQPQAASALIAEHTVFDASAW
QALEIAAGYPNLAPSHANQYVPQMCNLQAINGISFNKGCYMGQETVARMKYRGGNKRALY
ILQGTTSLNINLETGIEIELEDGYRKGGQIIEFVQRGNQVLLTAVLANDTESDAKLRFAD
DEQSSLRIQALPYSLED
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
atgactattgcagtttcgacacccaattgggatctggacgcctccacgcctccacttatg
ctcgccaacttatcccacctaggccttatcaaagtggttggcgaacagggccgcagtttt
atccatggccaagtgaccacagatatcagctcactcgaaaccaaccaatggcgctggggc
gcacattgtgatcctaagggaaagatgctggctagcttccgcacctttgccatccaagat
gcgctgttgatgttgatgccaaaggacactattgcagtggatctgccacaactgcaaaaa
tatgcggtatttagtaaggcgaccctgaccaatgcctctgatgagtggacattactcggt
gtggcgggtgaacaggctaaacaatttgtcagccaacactatggtgaagtcactcaggaa
ctcactctcatcgagcatggcgccattttaaaagatgcggatcgatttatattggttcta
caaccacaagccgcaagtgccctcattgccgagcataccgtatttgatgccagcgcttgg
caagcattagaaattgctgcgggttaccccaatctagcgccaagtcatgctaatcagtac
gtaccgcagatgtgtaacctacaggctatcaacgggatcagctttaacaaaggctgctac
atgggtcaagaaactgtggctcggatgaaataccgtggtggtaacaagcgtgcgctctat
attcttcaaggcaccacttccttaaatatcaatttggaaacgggtatcgagatagaattg
gaagacggttatcgcaagggtggacaaatcattgaatttgttcaacgtggtaatcaagtg
ctgctcaccgcagtgctcgccaacgataccgagagtgatgccaaactgcgtttcgctgat
gacgagcaatctagcttacgtattcaagcattgccctactcgctcgaagactag
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