Shewanella xiamenensis: MKD32_17345
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Entry
MKD32_17345 CDS
T08228
Name
(GenBank) OsmC domain/YcaO domain-containing protein
KO
K09136
ribosomal protein S12 methylthiotransferase accessory factor
Organism
sxm
Shewanella xiamenensis
Brite
KEGG Orthology (KO) [BR:
sxm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sxm03009
]
MKD32_17345
Ribosome biogenesis [BR:
sxm03009
]
Prokaryotic type
ribosomal protein modification factors
MKD32_17345
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
YcaO_C
YcaO
OsmC
Motif
Other DBs
NCBI-ProteinID:
UML93169
LinkDB
All DBs
Position
complement(3956452..3958638)
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AA seq
728 aa
AA seq
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MEIKVNFLDNLRLEAKFDDFTVTADQPIRYKGDGSAPSPFDYFLASSALCAAYFVKVYCK
SRDIPTDNIRLSQNNIVDPEDRYNQIFQINVELPDDISDKDREGILRSIDRCTVKKVVQT
GPEFRIETVENLDADANAMLMGHPAGESSTYILGKDLPLEQTIANMTAMLADLGMKIEIS
SWRNIVPNVWSLHIRDAASPMCFTNGKGATKESALCSALGEFIERLNNNFFYNDQFFGVE
IASSEFVHYPNEKWFALEEDDSLPAGLLDDYCLEIYNPDEELCGSHLIDTNSGNRERGIC
AIPYTRKSDGETVYFPSNLIENLFLSNGMSAGNNLKEAEVQCLSEIFERAVKRQIIEQEI
VLPDVPMSVLEKYPSILAGIKGLEEQGFPVVVKDASLGGQFPVMCVTLMNPKTGGVFASF
GAHPSFEVALERSLTELLQGRSFEGLNDVPKPTFNSMAVSEPENFVEHFIDSTGVISWRF
FSSKHDYEFCEWDFSGTNEEEADRLFGILEDLGKEVYVAEFTQLGASACRILVPDYSEVY
PVEDLIWDNTNKALDYREDILNLHSLSTKQLVNLVNRLEESQLDNYTDIRTLIGIVFDEN
TVWGKLTIIELKILIYLALGAHEEALELVGEFLQFNDNTVKRNLFYQAMSAVLEVTLDED
LELEDFSHNFTRMFGAEVMEQVVGSVTGKIRFSGLTKTSMQLEGIEPHLRLIESYKKLHA
ARKANAVK
NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
atggaaatcaaagttaattttctcgacaacctgagactcgaagccaagttcgacgatttt
acggtaacggccgatcagcctatccgttataagggcgatggctcggcgccgagccccttc
gactacttcttagcttcttcggcgctgtgtgcggcctattttgtgaaggtatattgtaaa
tcccgcgatattccgacggacaatatccgcctatcgcaaaacaatattgtcgacccagaa
gatcgctataaccagattttccagatcaatgtcgaattgcccgacgatatttcggataaa
gaccgcgaaggtattttgcgctctatcgaccgctgcacagtgaagaaagtagtgcagact
ggcccagaatttagaatcgaaaccgttgaaaacctcgatgccgacgccaatgctatgttg
atgggtcatcccgccggtgaaagtagcacctatattttgggcaaagacttaccgctggag
cagaccattgccaatatgacggcgatgctcgccgatttggggatgaagattgagatctcc
tcatggcgcaacattgtgcccaatgtgtggtcgctgcatatccgcgatgccgcatcgccc
atgtgttttaccaatggtaaaggcgcaaccaaagagagcgcgctgtgctcggccctcggc
gagtttatcgagcgtttaaacaataacttcttctataacgatcaattctttggggttgag
atcgcgagtagcgagtttgtgcattacccgaatgaaaaatggtttgctttagaagaggac
gattcgctgccagcgggattgttagatgattattgcctcgagatttacaatcccgatgag
gagctttgcggctcgcacttaatcgacaccaactcgggtaatcgtgagcgtggtatttgt
gcgattccttatacccgtaaatccgatggcgagacggtgtactttccatcaaacctgatt
gaaaacctgttcttaagcaacggcatgagcgcgggtaataacctgaaagaagccgaagtg
cagtgtctctctgagatcttcgagcgcgcggtgaaacgccaaattatcgagcaagaaatc
gttttgccagacgtgcctatgtcggtgttagaaaaatacccaagcattcttgcgggcatt
aagggcttagaagaacaaggcttcccagtagtagtgaaagacgcctccttaggcggtcag
ttcccggtcatgtgtgtgacgctgatgaacccgaaaaccggcggcgtattcgcctccttc
ggtgcccacccaagctttgaagtggccttagagcgcagcctaaccgaattacttcaaggt
cgcagttttgaaggcttaaacgatgtgccaaaaccgacctttaatagcatggcggtgagc
gagcctgaaaactttgttgagcactttatcgactcaacgggtgtgatctcctggcgcttc
tttagcagcaagcatgactatgagttctgcgaatgggatttctctggcaccaacgaagag
gaagcggaccgtttatttggcattttagaagatctcggtaaagaggtgtatgtcgccgaa
tttacccagttaggcgcatcggcttgccgtattttagtccctgattactctgaggtttat
ccagttgaagacctgatttgggacaacaccaacaaggcgctggattaccgtgaagatatt
ctcaatctgcattctttaagcactaagcaattggttaatcttgtgaatcgcttagaagaa
agtcagctggataactacaccgatattcgtacactgattggtatcgtcttcgatgaaaat
accgtctggggcaagttaacgattatcgaacttaagatcctaatttatctcgcactcggt
gcgcatgaagaggcgctcgaattagtcggtgagttcctgcaatttaacgacaacactgtg
aagcgcaatctgttctaccaagccatgagcgcggtactggaagtgacgctggatgaagac
cttgaactcgaagactttagccataactttactcgcatgtttggtgcggaagtgatggaa
caagtggtcggcagcgttactggtaaaatccgtttcagcggtttaactaagaccagcatg
cagctcgaagggattgagccacatttacgcttaatcgagagctataagaaactgcacgcc
gcccgcaaggctaacgcggttaagtaa
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