Shewanella xiamenensis: MKD32_17395
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Entry
MKD32_17395 CDS
T08228
Symbol
gcvP
Name
(GenBank) aminomethyl-transferring glycine dehydrogenase
KO
K00281
glycine cleavage system P protein (glycine dehydrogenase) [EC:
1.4.4.2
]
Organism
sxm
Shewanella xiamenensis
Pathway
sxm00260
Glycine, serine and threonine metabolism
sxm00630
Glyoxylate and dicarboxylate metabolism
sxm00670
One carbon pool by folate
sxm00785
Lipoic acid metabolism
sxm01100
Metabolic pathways
sxm01110
Biosynthesis of secondary metabolites
sxm01200
Carbon metabolism
Module
sxm_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
sxm00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
MKD32_17395 (gcvP)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
MKD32_17395 (gcvP)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
MKD32_17395 (gcvP)
00670 One carbon pool by folate
MKD32_17395 (gcvP)
Enzymes [BR:
sxm01000
]
1. Oxidoreductases
1.4 Acting on the CH-NH2 group of donors
1.4.4 With a disulfide as acceptor
1.4.4.2 glycine dehydrogenase (aminomethyl-transferring)
MKD32_17395 (gcvP)
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Gene cluster
GFIT
Motif
Pfam:
GDC-P
GcvP2_C
Beta_elim_lyase
Aminotran_5
Cys_Met_Meta_PP
Aminotran_1_2
Motif
Other DBs
NCBI-ProteinID:
UML93179
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All DBs
Position
complement(3969418..3972306)
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AA seq
962 aa
AA seq
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MTKQTLTQLEQHDLFLRRHIGPDSSQQQEMLNYVGAESLDDLTAQIVPESIRLSQELSIG
DSCGEAEGLAYIRGLAKQNQVFKSYIGMGYYGTQVPNVILRNVLENPGWYTAYTPYQPEI
AQGRLEAILNFQQVSMDLTGLDLASASLLDEATAAAEAMALAKRVSKAKKANIFFVADDV
FPQTLDVVKTRAECFGFEVVVGPAHEAVNHELFGALFQYSNRFGQITDFTDLFAELRAKN
VIVTVAADIMALVLLKSPGAMGADVVFGSAQRFGVPMGFGGPHAAFFVARDEHKRSMPGR
IIGVSKDTRGNRALRMAMQTREQHIRREKANSNICTAQILLANMASFYAVFHGPQGLKTI
ASRINRFADILAAGLQAKGVSLVNNTWFDTISIKGLDVAAVNARALAAEMNLRFDADGIV
GVSLDETTIRSDIEALFDVILGAGHGLDVAALDAQIVAQGSQSIPASLVRQDAILSHPTF
NRYQSETEMMRYIKRLESKDLALNYSMISLGSCTMKLNAAVEMIPVSWPEFANMHPFCPL
DQAKGYTQLIEELSSWLVNVTGYDAVCIQPNSGAQGEYAGLLAIRKYHESRGEAHRNICL
IPQSAHGTNPASAQLAGMQVVVTACDKQGNVDLEDLKAKAAEVAENLSCIMITYPSTHGV
YEESIREICNIVHQHGGQVYLDGANMNAQVGLTSPGFIGADVSHLNLHKTFAIPHGGGGP
GMGPIGVKAHLAPFVAGHVVVKPGRESDNNGAVSAAPYGSAGILPISWMYIKLLGSNGLK
KSTQTALLNANYVMKKLSEHYPVLFRGRNDRVAHECIIDLRPIKEASGVTEMDIAKRLND
YGFHAPTMSFPVAGTLMIEPTESESKVELDRFIDAMVSIRAEIAKVEAGEWPADNNPLHN
APHTMADIMDPAFDSRPYSREVAVFPSAAVRTNKFWPTVNRIDDVYGDRNLFCACVPLSD
YE
NT seq
2889 nt
NT seq
+upstream
nt +downstream
nt
atgaccaagcaaaccctcactcagttagaacagcacgatttattcttacgtcgccatatc
ggcccagatagcagccaacaacaagaaatgttgaactacgttggtgctgagtctttggac
gatctgaccgcgcaaatcgtgcctgagtcgatccgtttaagccaagagttgagcattggt
gattcctgcggcgaagccgaaggtttggcctacattcgtggtttagccaaacaaaaccaa
gtcttcaaaagctacattggtatgggctactacggtacccaagtgcctaatgtgatttta
cgtaacgtcttagaaaatccaggttggtacacggcgtacacgccctatcagccagagatc
gcccaaggccgtttagaagccattctaaacttccaacaagtgtcgatggatttaaccggt
ttagatttagcctctgcttcactgctggacgaagcgactgccgccgccgaagcgatggcg
ctggctaagcgtgtgtctaaagccaaaaaagcgaacatcttcttcgtagccgatgacgta
ttcccacaaaccttagacgtcgtaaaaacccgcgctgagtgttttggttttgaagtggtg
gtaggtcctgcccatgaagccgtaaaccatgagctgtttggtgctttgttccaatattca
aaccgtttcggtcaaatcactgacttcaccgacttatttgccgaattacgcgcgaaaaac
gtgattgtgactgttgctgccgacatcatggcattagtgttactcaagtcaccgggtgcc
atgggcgccgacgtggtcttcggtagcgcgcagcgtttcggtgtgccgatgggctttggt
ggtccacacgcagccttcttcgtggcccgtgacgagcacaaacgctctatgcctggccgt
atcatcggtgtgtcaaaggacacccgtggtaaccgcgcactgcgtatggcgatgcaaact
cgcgagcagcatatccgccgcgaaaaagccaactcaaacatttgtaccgcgcaaattctg
ttagcgaacatggcgtctttctacgccgtattccacggcccacagggcctgaaaaccatc
gcatcacgcatcaaccgctttgctgatatcttagccgcgggcttacaagctaaaggcgtg
agcttagtgaacaacacttggttcgataccatcagcatcaaaggcttagacgttgcagca
gtcaatgcacgcgcgctggctgctgaaatgaacctgcgtttcgatgctgacggcatcgtc
ggcgtgagcttagatgaaaccactatccgcagcgatatcgaagcgctgttcgatgtgatt
ttaggtgctggccatggcttagacgttgccgcattagatgcgcaaatcgtggcgcaaggt
agccaatcgattcctgcctctttagtgcgtcaagatgccatcctgagccacccaaccttc
aatcgctaccaaagcgaaaccgagatgatgcgttatatcaagcgtctcgaaagcaaagac
ttagcactgaactactcaatgatttcattgggttcatgcaccatgaagttaaacgctgcg
gttgaaatgatccctgtcagctggccagaatttgccaacatgcacccattctgcccactg
gatcaagccaaaggttacactcaactgattgaagaactgtcttcatggttagtgaatgtc
acaggttacgatgccgtgtgtatccaacctaactcaggcgcacagggagaatacgcgggt
ctgctggcgattcgtaaataccacgagtctcgcggcgaagcccacagaaacatctgctta
atcccacaatctgcccacggtactaaccccgcatcggcgcaattagcgggtatgcaagtg
gtggtaacggcctgtgataagcaaggtaacgtggatttagaagatctgaaggccaaagcg
gctgaagtggcagaaaacctgtcatgtatcatgatcacttacccatcgacccacggtgtg
tacgaagaatctatccgcgaaatctgcaacatagtgcaccagcacggtggtcaagtgtac
ttggacggcgccaatatgaacgcccaagttggcttaacttcaccaggctttatcggtgcc
gatgtatcgcaccttaacctgcacaaaaccttcgccattccacacggcggcggtggtcca
ggtatgggcccaatcggcgtgaaagcgcacttagcgccgttcgtcgcgggtcacgttgta
gtgaaaccaggccgcgaaagcgataacaacggtgcagtatcggcagcgccatatggcagt
gctggcattctgccaatcagctggatgtacattaagctgctcggttcaaacggcctgaaa
aagtcgactcaaaccgcgctgttaaacgctaactacgtgatgaagaagctgtctgaacac
tacccagtactgttccgtggccgtaacgatcgcgtcgcgcacgaatgtattatcgacctg
cgcccaatcaaagaagcctctggcgtgaccgaaatggatatcgctaagcgtctgaacgac
tacggtttccacgcgccaaccatgagcttccctgtagcgggcacgctgatgattgagcca
accgaatctgagtctaaggttgaactggaccgctttatcgacgctatggtgtcaatccgc
gccgaaatcgcgaaagttgaagcaggcgagtggccagcggacaataacccgctgcacaac
gcgccacacactatggccgatattatggacccagcgtttgattcacgcccatacagccgt
gaagtggccgtgttcccaagtgccgcagtgcgtactaacaagttctggccaactgtgaac
cgtattgatgacgtttacggcgaccgtaatttgttctgtgcatgtgtgccgttatcagac
tatgaataa
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