Shewanella xiamenensis: MKD32_17885
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Entry
MKD32_17885 CDS
T08228
Symbol
crp
Name
(GenBank) cAMP-activated global transcriptional regulator CRP
KO
K10914
CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
Organism
sxm
Shewanella xiamenensis
Pathway
sxm02020
Two-component system
sxm02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
sxm00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
MKD32_17885 (crp)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
MKD32_17885 (crp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sxm03000
]
MKD32_17885 (crp)
Transcription factors [BR:
sxm03000
]
Prokaryotic type
Helix-turn-helix
CRP/FNR family
MKD32_17885 (crp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
cNMP_binding
HTH_Crp_2
Crp
HVO_A0261_N
HTH_28
RepL
HTH_24
HTH_23
MarR
MarR_2
HTH_ParB
bAvd
Sigma70_r4
HTH_11
GntR
TrmB
HTH_7
HAV_VP
Motif
Other DBs
NCBI-ProteinID:
UML93271
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All DBs
Position
4077964..4078599
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AA seq
211 aa
AA seq
DB search
MALIGKPKPDPTLEWFLSHCHIHKYPAKSTLIHAGEDSDTLYYIVKGSVAVLIKDEEGKE
MILSYLNQGDFIGELGLFEEQAERTAWVRAKQACEIAEISYKKFKQLIQVNPEILMKLSA
QMAYRLQSTSQKVGNLAFLDVAGRIAQTLLHLAKQPDAMTHPDGMQIKITRQEIGQIVGC
SRETVGRILKMLEEQNLIQAHGKTIVVYGTR
NT seq
636 nt
NT seq
+upstream
nt +downstream
nt
atggctctgattggtaagccaaaaccggacccaactttggaatggtttttatcacactgt
cacattcataagtatcccgctaaaagcaccttgatccatgctggtgaagactcagatacc
ctttattacatcgtaaaaggttctgttgcggtattgattaaagatgaagaaggtaaggaa
atgatcctatcttatcttaatcaaggcgactttatcggtgagttaggattgttcgaagaa
caagctgaacgtactgcttgggttcgtgcaaaacaagcatgtgaaattgctgaaatctct
tacaagaagttcaagcaattaatccaagttaaccccgaaattctgatgaaactatcggct
caaatggcataccgcctacagagcactagccagaaagtcggtaatttagcattcctcgat
gtggcaggccgtattgcccaaacattgttgcatttagcaaaacaacctgatgccatgact
cacccagacggcatgcaaattaagatcactcgccaagaaattggtcagatcgttggttgt
tcccgcgaaactgtgggtcgtatcttaaagatgcttgaagaacaaaatctcattcaagca
cacggtaaaaccattgtggtttatggcacccgttaa
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