Shewanella xiamenensis: MKD32_18070
Help
Entry
MKD32_18070 CDS
T08228
Name
(GenBank) mechanosensitive ion channel
KO
K22051
miniconductance mechanosensitive channel
Organism
sxm
Shewanella xiamenensis
Brite
KEGG Orthology (KO) [BR:
sxm00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sxm02000
]
MKD32_18070
Transporters [BR:
sxm02000
]
Other transporters
Pores ion channels [TC:
1
]
MKD32_18070
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MscS_TM
MS_channel_2nd
MS_channel_3rd
MS_channel_1st
MscS_porin
Motif
Other DBs
NCBI-ProteinID:
UML95821
LinkDB
All DBs
Position
4113142..4116345
Genome browser
AA seq
1067 aa
AA seq
DB search
MPRILLFVIAFLSFSLHANSPLQLDKRLGLNNQNQQQNISIDDQIVELKNNIDRLAANAS
SFQQAQLDFEKNKKVIDQGLKEATKPLKLDKGTDLNQQASMAYLRLSELKESEAALGNQV
NELLQRHNLLPSVIANARQNVLQNKKTELAPIDTPAGELQQIQRIFFEQSLATHEAELAS
SQKRIELTQLQLQLVRQQLSQQEAFIETINKAINKQRQQQTDATLAKNLVDTTKVIDPIT
RNIADTNQIYGQKLQTLTLQINNVVEQQEQAELQYQSQAKQLANIQEQITWVKMNSAFGE
RFLQMLQSLPKPPNHEKLQTLIADARLDRYHLEQQQALNEQELEQANLYNEGQIKLLRSQ
QALLTQLMQSYDQYLSELGKLKVNYQQLSQQHLTLKNTLNEHLFWVPNAASINKLWLTDI
QRSALWLIQQAQWGQLSKAWQEQNDYWSWWIILLVLCLVVQDLIKPKFNRLLGNYATYVG
NVTQDKFIYTFKSLVLSLGYALIKPLPIVAAGWIFYQSDRNFVQAVGMGILAIGLVYLLY
RLIFILALDKGVLVGHFKRPSKLIQAGQLRLKHFVFVASPLLGIMGFTEILDASLIRNSI
GRGAFICFCVVLFLLYKDILLLSRQNSVAQKEGKNKRLIQKMLWALLIAVPLLSAGLAFR
GYYFTAFQMLLQLQLSIILGLSFLLLYQLIKRWMLIERRRIAFDRAKAKRAERLAQREKG
ETHHSSNDGLDTYEEPVVDLETISSQSLGLVRSLLLLAFLASLIGLWTQTHTALFSFLDG
ITLWTTNTSVNGVEQQLPITMKSLLFGLIIVGFSLMIATNLPGLLELMILQRLDLTPGTG
FAITTVSRYLVVFLGLLIGFSNLGMEWSKLQWLIAALSLGLGFGLQEIFANFISGLIILF
EKPVRIGDTVTIRDLTGTVSKIQIRATTIIDWDRKEIIIPNKAFITEQLINWSLSDPITR
VIVYVSVARDSDPAKVEATLYQAVQECEDALPNPEPEVWFAGFGKHTQDYEVRAYAKDMS
ARWPLRHDLHKRITRKLKENNLELAYPQMEIHIKNGQTRDQVGIIRS
NT seq
3204 nt
NT seq
+upstream
nt +downstream
nt
atgccacgtattttattgttcgttattgcttttttgtctttttctctccatgccaattcg
cccttacaattggacaagcgtcttggcctaaacaaccaaaatcagcaacaaaatattagc
attgacgatcaaattgttgagcttaaaaacaacattgacagactggcggccaatgcgagc
agttttcagcaggcgcagctggattttgaaaaaaataaaaaggtcatcgatcagggctta
aaagaggccactaagccattaaagctggataaaggaacagatcttaaccagcaagcctcg
atggcttatttacgcctatctgagttaaaagagagcgaggcggctctcggcaatcaagtc
aacgaactactacagcggcataatctactgccttccgtcattgccaatgcaagacaaaat
gtgctgcaaaataaaaaaacggaattggcgcctatcgatacgccagcgggtgaattacaa
caaatacagcggattttcttcgaacagagcctagccacacatgaggccgagcttgccagt
agccaaaagcgtatcgaacttacccagctacagttacagttagttcgccagcaattgagc
cagcaagaagcctttattgaaactatcaataaggcgatcaacaagcagcgccaacaacaa
accgatgccacgctggccaagaatttagttgataccactaaagtcatcgatccgattaca
cgcaatatcgccgataccaatcagatctacggccaaaaactgcaaaccttaaccttgcaa
atcaataacgtggtagagcagcaagaacaggctgagctccaatatcaatcccaagccaag
caactcgcaaatatccaagagcaaattacttgggtcaaaatgaactccgcctttggcgaa
cgctttttgcagatgttgcaatcgctacccaaaccgccaaaccatgaaaaactacaaact
cttatcgccgatgcgcgtctcgacaggtatcacctagagcaacagcaggcactcaacgaa
caagaactcgaacaagccaatctctataatgaggggcagattaagctactgcgctcacag
caagcattgctgactcagctaatgcagagttatgaccagtatttgagtgaactaggcaag
cttaaagtgaattatcagcagcttagccaacagcacctgacgctaaaaaacaccctaaac
gaacatctattttgggtgcctaatgccgcgagcattaacaaactctggctcaccgatatt
caacgtagcgccctatggctaatccaacaggcacaatggggacaactgagcaaagcttgg
caggagcaaaacgactattggtcatggtggatcattctgctagtgctctgtttagtggtt
caagatttaataaaacctaaattcaatcgattactcggcaactatgcaacctatgtgggt
aatgtgactcaggataaatttatttataccttcaaatccttagtccttagcctaggttat
gccttaatcaaaccgctacccatagtggcagcaggatggattttctatcaatcagaccgt
aactttgtgcaagcggtcggcatgggaattttagcaataggattggtttacctattgtat
cgattgatttttattcttgctctagataaaggcgtattggttggtcacttcaaacgcccc
tcaaaactgattcaggcaggccagctcaggctcaaacactttgtatttgtcgccagtccc
ttgcttggcattatgggctttaccgaaatactcgatgcctcgcttatccgcaacagcatt
ggccgcggcgcatttatctgtttttgtgtggtgttattcttgttatacaaggatattttg
ctattaagccggcaaaatagcgttgctcaaaaagaggggaagaacaaacggctgatccaa
aaaatgctctgggcattgttgatcgctgttcccctgctgagcgctgggctcgcctttagg
ggctactatttcaccgccttccagatgttgttgcagttgcagctatcgatcatattggga
ttaagctttttactgctctatcaattaattaaacgttggatgttgattgagcgccgccgc
attgccttcgaccgcgcgaaagcgaaacgggctgagcgtttagcccaacgggaaaagggc
gaaacacaccatagctccaatgatggcttagatacctacgaagaacccgtagtcgacctc
gaaaccatttcgagtcagtcccttggattggtgcgttccttattgctactggcgttttta
gccagcttgattggcctgtggacgcaaacccatacggcgctattttccttcttggatggc
atcaccctctggaccaccaataccagcgtcaatggtgtcgagcaacagttgcccatcacc
atgaaatcgctgttattcggcttaatcatcgttggcttctcgctgatgattgcgaccaat
ttacccggtttgcttgagctgatgatcctacagcgtctcgacctgacaccgggcactggc
tttgctatcaccacagtaagtcgttatttagtggtatttttaggcctgctgattggcttt
tcaaatctcgggatggaatggtcaaaactgcaatggttgattgcagccttgtcactgggt
ctcggttttggtttgcaggagatttttgccaactttatctcgggtttgattattctgttc
gaaaagccagtacgtattggcgatacggtgacaatccgcgatctcaccgggactgtgagt
aaaatccagatccgtgccaccaccattatcgactgggacagaaaggaaattatcattccg
aacaaggcttttattaccgagcaattgattaactggtcgctgtcggaccctattacccgt
gtcattgtttatgtgtcggttgcccgcgattcggatccagcaaaagtggaagcaacgctt
tatcaagctgttcaggaatgcgaagatgcgttgccgaatccagagccagaagtgtggttt
gcgggctttggtaaacatactcaagactatgaagtacgagcctatgcaaaagatatgtcg
gcacgctggccactacgccacgatctgcataaacgcattacccgtaagcttaaagaaaac
aacttagaactcgcctatccgcaaatggaaatccatattaaaaatggccaaactcgcgat
caggtcggcataatccgcagttaa
DBGET
integrated database retrieval system
