Shewanella xiamenensis: MKD32_18260
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Entry
MKD32_18260 CDS
T08228
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
sxm
Shewanella xiamenensis
Brite
KEGG Orthology (KO) [BR:
sxm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sxm03032
]
MKD32_18260
03036 Chromosome and associated proteins [BR:
sxm03036
]
MKD32_18260
03400 DNA repair and recombination proteins [BR:
sxm03400
]
MKD32_18260
DNA replication proteins [BR:
sxm03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
MKD32_18260
Chromosome and associated proteins [BR:
sxm03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
MKD32_18260
DNA repair and recombination proteins [BR:
sxm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
MKD32_18260
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-DNA_bdg
Motif
Other DBs
NCBI-ProteinID:
UML93337
LinkDB
All DBs
Position
4159184..4159456
Genome browser
AA seq
90 aa
AA seq
DB search
MNKTELIAKIAENADITKAEAARALKSFEAAITESMKNGDKISIVGFGSFETATRAARTG
RNPQTGKEIQIAEATVPKFKAGKTLRDSVN
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaaactgaacttatcgccaaaattgcagaaaatgccgatatcactaaagctgaa
gcagcacgagcattgaaatctttcgaagcggcgattactgaatcaatgaaaaacggtgac
aaaatctctatcgtcggatttggctcctttgaaacagcgactcgtgcagctcgtactggt
cgtaacccacaaacgggcaaagaaatccagatcgctgaagccactgtgcctaagtttaaa
gcgggtaaaaccttgcgtgatagtgtgaactaa
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