Shewanella xiamenensis: MKD32_18660
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Entry
MKD32_18660 CDS
T08228
Name
(GenBank) DUF853 domain-containing protein
KO
K06915
DNA double-strand break repair helicase HerA and related ATPase
Organism
sxm
Shewanella xiamenensis
Brite
KEGG Orthology (KO) [BR:
sxm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sxm03400
]
MKD32_18660
DNA repair and recombination proteins [BR:
sxm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Archaeal homologous recombinant proteins
MKD32_18660
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
HerA_C
DUF87
FtsK_SpoIIIE
AAA_22
ResIII
AAA_25
AAA_10
AAA_30
TrwB_AAD_bind
nSTAND_NTPase5
T2SSE
CbiA
AAA_16
AAA_7
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
UML93413
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Position
4244587..4246068
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AA seq
493 aa
AA seq
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MNTLLLGKGEQQVHLNLKYANRHGLIAGATGTGKTVSLMTLAEGFSRQGVPVFLTDIKGD
ISGLGVAGTPNDKLLKRAAEIGIVDYQTEANPVVCWDLAGEQGHPLRTTVSEMGPTLLGR
ILELNDTQSSILDIVFQLADDQGLLLLDLDDLRAMLNLVADERKDISAKYGLISAQSLAA
IQRSVLGLARDGGNDFFGEPALQLEDLMRTNLQGRGIINLLAANKLILTPSLYSSFLLWL
LSELFENLPEVGDLDKPKLVFFIDEAHLLFEGCPASLLKRIEQIMRLIRSKGVGVYFCSQ
FPDDIPNEILGQLGNRIQHALRAYTPRDQKAVKTAAETFVSNPKLVVSEVISQLAVGEAL
VSTLAEKGVPTMVERTLIAPPRCRMGPATTEELTAIRHQSPIGGKYDTLVNRESAYELLN
QRHTEQTNGSGTAQPTTKAAEQGWFSELIFGNKRRQGLAETLSKQAARTVGNQLGKQILR
GLLGGILGKSTRR
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
ttgaatactctactcttaggtaaaggtgagcaacaggttcacttaaatcttaaatatgcc
aaccgccacggactgatcgctggcgctacaggtacaggcaaaaccgtttcgctgatgacg
ctagccgaaggcttttcccgccaaggtgtacccgtctttcttactgatatcaaaggcgat
atttcaggactcggtgtagcgggcactccaaacgataagctattgaagcgggcggcagaa
atcgggatagtagattatcaaaccgaggcaaaccccgtcgtttgctgggatttggcagga
gagcaaggtcatccattacgcacaaccgtgagtgaaatggggccgaccttactcgggcgc
attctcgagctcaatgacacccaaagcagcattttagacatagtgtttcaactggctgac
gaccaaggtttattgttactcgacctcgacgatttgcgcgccatgctcaacttagtggcc
gatgagcgcaaagacatctccgccaaatatgggcttatcagcgcccagtcccttgccgcc
attcaacgctcagtgcttggtttagcgcgcgatgggggtaacgactttttcggcgaacct
gcacttcaactcgaagacttgatgcgcactaatttgcaagggcgcggcattatcaacttg
ttagccgccaataaactaatcctcacccctagcctctactccagcttcttactctggctg
ctatcagaactctttgaaaatttacccgaagtcggcgatctcgataagccaaaattagtc
ttctttattgatgaggcacacctattatttgagggctgcccagcaagtttgcttaaacgc
atagagcaaattatgcggcttatccgctccaagggcgtcggggtatatttctgctcgcaa
tttcccgacgacattcccaatgaaattctcggtcaactcggcaatcgcattcagcatgcc
ctcagggcgtataccccaagggatcaaaaagccgttaaaaccgcagccgaaacctttgta
tcgaatcctaaattggtggtcagcgaggtaatttcacaactcgccgtgggcgaagcctta
gtgtcaacccttgccgagaaaggtgtgccgactatggttgagcgcaccttaatagcacca
ccacgctgccgtatggggccagccacgaccgaggagttaaccgctatccgtcatcagagt
ccgattggtggtaaatacgataccttagtcaatcgcgaatccgcctatgagctattgaat
caacgtcataccgaacaaacgaatggcagcggtactgcacagccaacgaccaaagcagct
gagcaaggctggtttagcgagcttatctttggtaataaacgccgccaaggattagccgaa
accttgtcgaaacaagcggcaagaaccgttggtaatcaactcggaaaacaaattttacgc
ggattactcggcggtatactggggaaatcgactcgcaggtaa
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