Shewanella xiamenensis: MKD32_19660
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Entry
MKD32_19660 CDS
T08228
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
sxm
Shewanella xiamenensis
Brite
KEGG Orthology (KO) [BR:
sxm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sxm03021
]
MKD32_19660 (rpoH)
Transcription machinery [BR:
sxm03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
MKD32_19660 (rpoH)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
UCR_14kD
Fe_dep_repress
2Fe-2S_thioredx
Motif
Other DBs
NCBI-ProteinID:
UML93598
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Position
complement(4486437..4487294)
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AA seq
285 aa
AA seq
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MTFQTQSMALTVPQGSSSLEAYIHSVTSMTMLDAETEYELAKRLQETGDLQAAKQLIMSH
LRFVVHVAKGYSGYGLPQADLIQEGNIGLMKAVKRFDPDVGVRLVSFAVHWIKAEIHEYV
LKNWRIVKVATTKAQRKLFFNIRKAKTRLGWFSDDEVAMVAENLGVSKADVTEMESRMAA
QDPAFDLSSDNDDEQDFAPVQYLEDHSSDLAENIENDNWESNAQGRLLSAIKTLDERSQH
ILRARWLDDDKTTLQELAETYQVSAERIRQLEKNAMNKLKACMEA
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atgacctttcaaacgcaatcaatggcactaacagtccctcagggcagcagtagtttagaa
gcttatatccattcagtgactagcatgacaatgttagacgctgagactgagtatgagtta
gccaagcgtttgcaggaaacgggtgatctgcaagcagcgaagcaactgattatgtcgcac
ttacgttttgtggtgcacgttgctaagggctactcaggttacggtctgccgcaggcggat
ttgatccaagaaggcaacatcggtctgatgaaagcggttaagcgtttcgatcccgatgtg
ggtgtccgtctagtgtcttttgctgtgcactggattaaagctgaaattcacgaatatgtg
ctgaaaaactggcgcattgttaaagttgctaccaccaaagcgcaacgcaagttgttcttt
aatatccgtaaagcgaaaactcgcctcggttggtttagcgatgatgaagtcgcaatggtc
gcagaaaacttaggtgtctctaaggccgatgtgactgagatggaatcacgtatggcggcg
caggatcctgcgtttgatctgagcagtgataacgatgatgagcaggattttgcccctgtg
caatatcttgaagatcattcatcggatttagccgaaaacatcgaaaacgataactgggaa
tctaatgcccaaggtcgtttattgtcggccatcaaaaccttagacgagcgtagccagcat
attctgcgtgcccgttggttagacgatgataaaactacccttcaggaattggcagaaacc
tatcaagtgtcagctgagcgtattcgccagttagagaaaaacgccatgaacaagcttaag
gcttgtatggaagcctaa
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