Streptomyces xanthii: IAG42_02830
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Entry
IAG42_02830 CDS
T07861
Name
(GenBank) Ku protein
KO
K10979
DNA end-binding protein Ku
Organism
sxn
Streptomyces xanthii
Pathway
sxn03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
sxn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
IAG42_02830
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sxn03400
]
IAG42_02830
DNA repair and recombination proteins [BR:
sxn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
IAG42_02830
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
Rho_N
FANC_SAP
BRISC_FAM175B_helical
Motif
Other DBs
NCBI-ProteinID:
QNS02656
UniProt:
A0A7H1B1Q1
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Position
588429..589346
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AA seq
305 aa
AA seq
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MARAVWGGALTFGLVSLPVRLFTATDSHAVHFHQLERGTSDRVRNRRVNERTGDEVPLDA
IVKGYDVGDEYVLVEPGELDDIAPGRSKSLEIDGFVDLDDIAPVFFDKTYYLAPKGKDFG
KTYALLAKAMEHQDKAAIATFVMRNREYLVAVKAESGLLTLHTLHWADEIRDPRKLDSLP
GRVKVSDREVRMAERLIDELSMEWDPEEFHDTYQERVARLVEAKRTGEPVERADPPAEST
NVVDLMDALRASVDRAKKPTDLGSLTKKELYEKAAEAGVPGRSSMNRDELVKALSETSGR
RRSAA
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atggctcgagccgtatggggcggggcactgaccttcgggctggtgtccctgccggtacgc
ctgttcacggcgacggacagccacgccgtccacttccatcaactggagcgcggcacctcg
gaccgcgtccgcaaccggcgggtgaacgaacgcaccggcgacgaggtgccgctcgacgcg
atcgtcaaggggtacgacgtcggcgacgagtacgtgctcgtcgaacccggcgaactcgac
gacatcgccccgggacggtcgaagtccctcgagatcgacggcttcgtggacctcgacgac
atcgcacctgtcttcttcgacaagacgtactacctcgccccgaagggcaaggacttcggc
aagacgtacgcgctgctggcgaaggcgatggagcaccaggacaaggcggcgatcgccacg
ttcgtcatgcgcaaccgtgagtacctggtcgctgtgaaggccgagtcgggactgctcacg
ctgcacaccctgcactgggccgacgagatccgggacccgcgcaagctcgactcgctgccc
ggccgggtcaaggtctccgaccgggaggtacggatggccgagcggctcatcgacgagctg
agcatggagtgggaccccgaggagttccacgacacctaccaggagcgggtggcgcggctc
gtcgaggccaaacggaccggcgagccggtcgaacgggccgatcccccggcggagtcgacc
aacgtcgtcgacctcatggacgccctgcgcgcgagcgtggaccgggcgaagaagcccacg
gatctcggctccctgaccaagaaggagctctacgagaaggccgccgaggccggcgtcccg
ggccgctcctccatgaaccgcgacgaactcgtcaaggcactgtccgagacatccggccgg
cgcaggtccgccgcctga
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