Streptomyces xanthii: IAG42_08610
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Entry
IAG42_08610 CDS
T07861
Name
(GenBank) RNA polymerase sigma factor
KO
K03086
RNA polymerase primary sigma factor
Organism
sxn
Streptomyces xanthii
Pathway
sxn02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
sxn00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
IAG42_08610
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sxn03021
]
IAG42_08610
Transcription machinery [BR:
sxn03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
IAG42_08610
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
HC2
Sigma70_r1_1
CDC27
Motif
Other DBs
NCBI-ProteinID:
QNS03684
UniProt:
A0A7H1B4M9
LinkDB
All DBs
Position
complement(1883404..1884936)
Genome browser
AA seq
510 aa
AA seq
DB search
MSASTSRTLPPEIAESVSVMALIERGKADGQIAGDDVRRAFEADQIPATQWKNVLRSLNQ
ILEEEGVTLMVSAAEPKRPRKSVAAKSPAKRTTTKTVAAKTVTAKKVATGTPAAEAPAGA
SADEAPVKKAAAKKATTKKAAAKKTTAKKTAAKKTAAKKDDDLLEDEATEETPATGKAEG
EPEAEGQGFVLSDEDEDDAPAQQVAAAGATADPVKDYLKQIGKVPLLNAEQEVELAKRIE
AGLFAEDKLANADKLAPKLKRELEIIAEDGRRAKNHLLEANLRLVVSLAKRYTGRGMLFL
DLIQEGNLGLIRAVEKFDYTKGYKFSTYATWWIRQAITRAMADQARTIRIPVHMVEVINK
LARVQRQMLQDLGREPTPEELAKELDMTPEKVIEVQKYGREPISLHTPLGEDGDSEFGDL
IEDSEAVVPADAVSFTLLQEQLHSVLDTLSEREAGVVSMRFGLTDGQPKTLDEIGKVYGV
TRERIRQIESKTMSKLRHPSRSQVLRDYLD
NT seq
1533 nt
NT seq
+upstream
nt +downstream
nt
gtgtcggccagcacatcccgtacgctcccgccggagatcgccgagtccgtctctgtcatg
gcgctcattgagcggggaaaggctgatggccagatcgccggcgacgacgtacgccgtgcg
ttcgaggccgaccagattccggccactcagtggaagaacgttctgcgcagcctcaaccag
atcctcgaggaagagggtgtgacgctgatggtcagtgccgctgagcccaagcgtccccga
aagagcgtcgcagccaagagtccggccaagcgcaccaccaccaagaccgtcgcggccaag
accgtcaccgccaagaaggtcgccaccggcacccccgcggcggaggctcccgccggggcg
tcggcggacgaggcgccggtcaagaaggccgcggccaagaaggcgacgaccaagaaggcc
gccgccaagaagacgaccgcgaagaagaccgcggccaagaagacggccgccaagaaggac
gacgaccttctcgaggacgaggcgaccgaggagacccccgccaccggcaaggccgagggc
gagcccgaggccgagggccagggcttcgtcctgtccgacgaggacgaggacgacgcgccc
gcgcagcaggtcgcggccgccggcgccaccgccgacccggtcaaggactacctgaagcag
atcggcaaggtcccgctgctcaacgccgagcaggaggtcgagctcgccaagcgcatcgag
gccggcctgttcgccgaggacaagctggcgaacgccgacaagctggctccgaagctcaag
cgcgagctcgagatcatcgccgaggacggccgccgcgccaagaaccacctgctggaggcc
aacctccgcctcgtggtctccctggccaagcgctacaccggccgcggcatgctcttcctg
gacctgatccaggagggcaacctcggtctgatccgcgcggtcgagaagttcgactacacc
aagggctacaagttctccacgtacgccacctggtggatccgtcaggcgatcacccgcgcc
atggccgaccaggcccgcaccatccgtatcccggtgcacatggtcgaggtcatcaacaag
ctcgcgcgcgtgcagcgccagatgctccaggacctgggccgcgagcccaccccggaggag
ctggccaaggaactcgacatgacccccgagaaggtcatcgaggtccagaagtacggccgc
gagcccatctcgctgcacaccccgctgggcgaggacggtgacagcgagttcggtgacctc
atcgaggactccgaggccgtcgtcccggccgacgccgtcagcttcacgctcctccaggag
cagctgcactcggtcctcgacaccctgtccgagcgcgaggccggcgtggtctccatgcgc
ttcggtctcaccgacggtcagccgaagaccctcgacgagatcggcaaggtgtacggcgtg
acgcgcgagcgcatccgccagatcgagtcgaagaccatgtcgaagctgcgccacccgtcg
cgctcgcaggtcctgcgcgactacctcgactag
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