KEGG   Streptomyces xanthii: IAG42_08610
Entry
IAG42_08610       CDS       T07861                                 
Name
(GenBank) RNA polymerase sigma factor
  KO
K03086  RNA polymerase primary sigma factor
Organism
sxn  Streptomyces xanthii
Pathway
sxn02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:sxn00001]
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    IAG42_08610
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:sxn03021]
    IAG42_08610
Transcription machinery [BR:sxn03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     IAG42_08610
SSDB
Motif
Pfam: Sigma70_r3 Sigma70_r2 Sigma70_r4 Sigma70_r1_2 HC2 Sigma70_r1_1 CDC27
Other DBs
NCBI-ProteinID: QNS03684
UniProt: A0A7H1B4M9
LinkDB
Position
complement(1883404..1884936)
AA seq 510 aa
MSASTSRTLPPEIAESVSVMALIERGKADGQIAGDDVRRAFEADQIPATQWKNVLRSLNQ
ILEEEGVTLMVSAAEPKRPRKSVAAKSPAKRTTTKTVAAKTVTAKKVATGTPAAEAPAGA
SADEAPVKKAAAKKATTKKAAAKKTTAKKTAAKKTAAKKDDDLLEDEATEETPATGKAEG
EPEAEGQGFVLSDEDEDDAPAQQVAAAGATADPVKDYLKQIGKVPLLNAEQEVELAKRIE
AGLFAEDKLANADKLAPKLKRELEIIAEDGRRAKNHLLEANLRLVVSLAKRYTGRGMLFL
DLIQEGNLGLIRAVEKFDYTKGYKFSTYATWWIRQAITRAMADQARTIRIPVHMVEVINK
LARVQRQMLQDLGREPTPEELAKELDMTPEKVIEVQKYGREPISLHTPLGEDGDSEFGDL
IEDSEAVVPADAVSFTLLQEQLHSVLDTLSEREAGVVSMRFGLTDGQPKTLDEIGKVYGV
TRERIRQIESKTMSKLRHPSRSQVLRDYLD
NT seq 1533 nt   +upstreamnt  +downstreamnt
gtgtcggccagcacatcccgtacgctcccgccggagatcgccgagtccgtctctgtcatg
gcgctcattgagcggggaaaggctgatggccagatcgccggcgacgacgtacgccgtgcg
ttcgaggccgaccagattccggccactcagtggaagaacgttctgcgcagcctcaaccag
atcctcgaggaagagggtgtgacgctgatggtcagtgccgctgagcccaagcgtccccga
aagagcgtcgcagccaagagtccggccaagcgcaccaccaccaagaccgtcgcggccaag
accgtcaccgccaagaaggtcgccaccggcacccccgcggcggaggctcccgccggggcg
tcggcggacgaggcgccggtcaagaaggccgcggccaagaaggcgacgaccaagaaggcc
gccgccaagaagacgaccgcgaagaagaccgcggccaagaagacggccgccaagaaggac
gacgaccttctcgaggacgaggcgaccgaggagacccccgccaccggcaaggccgagggc
gagcccgaggccgagggccagggcttcgtcctgtccgacgaggacgaggacgacgcgccc
gcgcagcaggtcgcggccgccggcgccaccgccgacccggtcaaggactacctgaagcag
atcggcaaggtcccgctgctcaacgccgagcaggaggtcgagctcgccaagcgcatcgag
gccggcctgttcgccgaggacaagctggcgaacgccgacaagctggctccgaagctcaag
cgcgagctcgagatcatcgccgaggacggccgccgcgccaagaaccacctgctggaggcc
aacctccgcctcgtggtctccctggccaagcgctacaccggccgcggcatgctcttcctg
gacctgatccaggagggcaacctcggtctgatccgcgcggtcgagaagttcgactacacc
aagggctacaagttctccacgtacgccacctggtggatccgtcaggcgatcacccgcgcc
atggccgaccaggcccgcaccatccgtatcccggtgcacatggtcgaggtcatcaacaag
ctcgcgcgcgtgcagcgccagatgctccaggacctgggccgcgagcccaccccggaggag
ctggccaaggaactcgacatgacccccgagaaggtcatcgaggtccagaagtacggccgc
gagcccatctcgctgcacaccccgctgggcgaggacggtgacagcgagttcggtgacctc
atcgaggactccgaggccgtcgtcccggccgacgccgtcagcttcacgctcctccaggag
cagctgcactcggtcctcgacaccctgtccgagcgcgaggccggcgtggtctccatgcgc
ttcggtctcaccgacggtcagccgaagaccctcgacgagatcggcaaggtgtacggcgtg
acgcgcgagcgcatccgccagatcgagtcgaagaccatgtcgaagctgcgccacccgtcg
cgctcgcaggtcctgcgcgactacctcgactag

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