Streptomyces xanthii: IAG42_08950
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Entry
IAG42_08950 CDS
T07861
Name
(GenBank) HAMP domain-containing protein
Organism
sxn
Streptomyces xanthii
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAMP
HAMP_2
Response_reg
HATPase_c
HisKA
GAF_2
GAF
RNase_Y_N
Med21
ApoLp-III
OmpH
Motif
Other DBs
NCBI-ProteinID:
QNS03745
UniProt:
A0A7H1B4U0
LinkDB
All DBs
Position
complement(1967316..1972823)
Genome browser
AA seq
1835 aa
AA seq
DB search
MESGAATRGKKARAEGGQSLTKQRKTRGGSGTTTVDTASLNRLLAGLVAMRDGNFRKRLT
VSGDGVMSEIAAVFNEVADRNLHLTGELSRVRRMVGREGKLTERLEEGACEGSWAAAVSA
SNALVDDLVRPVSEVSRVLSAVAEGDLSPRMELRAQGPGDGTGHPLRGEFLKVGRTVNNL
VDQLSTFTDEVTRVASEVGTEGKLGGQARVRGMSGSWKDLTDSVNNMAYRLTAQVRDIAL
VTTAVAKGDLSRKVTVDVAGEMLELKNTVNTMVDQLSSFSSEVTRVAREVGTEGELGGQA
QVPGVAGVWKDLTDSVNLMAGNLTAQVRGIAEVTTAVANGDLSRKVTVSARGEVAQLAET
INQMTETLRTFADEVTRVANEVGAEGQLGGQANVPGAAGTWKDLTDSVNTVFRNLTTQVR
DIATVTTAVANGDLSQKVTVDVAGEMLELKNTVNTMVDQLSAFGAEVTRVAREIGVEGEL
GGQALVVGAAGTWKDLTDSVNTAFRNLTGQVRNIAQVTTAVANGDLSQKVTVDVSGEMLQ
LKNTVNTMVDQLSSFADQVTRMARDVGTEGRLGGQARVDGVSGTWKELTDSVNFMAGNLT
SQVRQIAQVTTAVARGDLSQKIDVDARGEILELKNTINTMVDQLSAFADQVTRVAREVGT
EGRLGGQAQVPGVAGVWRDLTDSVNGMAGNLTAQVRNIAQVATAVARGDLSQKIDVDARG
EILELKNTLNTMVDQLSAFAEQVTRVSREVGTDGILGGQAEVQGVSGTWKDLTQSVNGMA
NNLTLQVRNIAEVTTAVARGDLSKKITVDAKGEILELVTTVNTMVDQLSSFAEQVTRVAR
EVGTEGQLGGQARVPGVTGIWKDLSDNVNLMANNLTMQVRNISQVAAAVANGDLTRTVTI
EARGEVAQLADTFNTMVKTLSSFADQVTKVAREVGTDGILGGQARVPGVSGTWKDLTESV
NGMASNLTGQVRNIAMVTTAIAKGDLTKKIDIDARGEILELKTTINTMVDQLSSFAEEVT
RVAREVGTEGQLGGQARVRDVDGTWRDLTESVNEMAGNLTRQVRAIAAVATAVTRGDLNL
KIDVDAAGEIQVLQDNINKMISNLRDTTIANEEQDWLKGNLARISGLLQGRRDLDDVASL
IMSELTPVVSAQHGAFFLALPLDEAADPATADEDAYELRMLGSYGYSMGSMPTSFRPGET
LIGTAAQERRTILVDNAPSGYLKIASGLGEAPPAQVVVIPVLFEGTVLGVIELASFTPFT
QIQKDFLNQIAEMIATSVNTISVNSKTEVLLKQSQELTEQLRERSAELENRQKALQASNA
ELEEKAELLARQNRDIEVKNTEIEEARQVLEERAEQLAVSMRYKSEFLANMSHELRTPLN
SLLILAKLLADNADANLTPKQVEFAETIHGAGSDLLQLINDILDLSKVEAGKMDVSPTRI
ALVQLVDYVEATFRPLTAEKQLDFSVRVSPELPTTLHTDEQRLLQVLRNLLSNAVKFTDS
GAVELVIRPAGSDVPHAIREQLLEAGSLQDADADLIAFSVTDTGIGIAGSKMRVIFEAFK
QADGTTSRKYGGTGLGLSISREIARLLGGEIHAASEPGRGSTFTLYLPLHPAELPPQGYA
QLAPSVEPGRPLALDPAPEPAEAETPAEVKSYQETQSGAAALFRRRRRHAPAPEQTTDLG
ARASGDGQQGRERWDAAGEESAPKPRRAFQFGGEKVLIVDDDIRNVFALTSVLEQHGLSV
LYAENGREGIEVLEQHDDVTVVLMDIMMPEMDGYATTTAIRRMPQFAGLPIIALTAKAMK
GDREKAIESGASDYVTKPVDPDHLLAVMEQWMRGE
NT seq
5508 nt
NT seq
+upstream
nt +downstream
nt
gtggagtctggcgcagcgacgcggggcaagaaagcgcgcgcggaaggcggacagtccctg
acgaaacagcgcaaaacgcgcggcggcagtggcacgacgacggtcgacacggcctcgctg
aaccggctgctggccggtctggtcgcgatgcgggacggcaacttccgcaagcggctgacg
gtcagcggcgacggcgtgatgtcggagatcgcggccgtcttcaacgaggtggccgaccgg
aacctgcatctgacgggtgagctgtcacgcgtgcgccgcatggtcgggcgcgagggcaag
ctgaccgagcggctggaggagggcgcctgcgagggctcctgggccgccgcggtgagcgcg
tcgaacgccctggtcgacgacctcgtacgacctgtctccgaggtcagcagggtgctctcc
gcggtcgcggagggtgacctgtcgccccggatggagctgcgggcgcaggggccgggggac
gggaccgggcatccgctgcgcggcgagttcctcaaggtcggccggacggtcaacaacctg
gtcgaccagctctccaccttcaccgacgaggtcacgcgcgtggccagtgaggtggggacc
gagggcaagctcggcggccaggcccgggtgcgcggaatgtcgggttcgtggaaggacctc
acggattccgtcaacaacatggcgtaccggctcaccgctcaggtgcgtgacattgctctc
gtgacgacggccgtggccaagggcgatctgtcccggaaggtcaccgtcgacgtcgcgggc
gagatgctcgagctgaagaacaccgtcaacacgatggtggaccagctgtcctcgttctcc
tccgaggtgacccgcgtcgcccgcgaggtgggcaccgagggcgagctcggcgggcaggcg
caggtgcccggtgtggccggcgtgtggaaggacctcaccgattcggtgaacctgatggcc
ggcaacctgacggcccaggtgcgcggcatcgccgaggtcaccacggcggtcgccaacggc
gacctgtcgcggaaggtgacagtgtcggcgcgcggagaggtcgcccagctcgccgagacg
atcaaccagatgaccgagacgctgcgcacgttcgcggacgaggtcacacgcgtcgccaac
gaggtgggcgccgagggccagctcggcggacaggccaatgtgccgggcgcggcgggtacc
tggaaggacctcacggactcggtcaacacggttttcaggaacctgacgacccaggtgcgt
gacatcgccactgtcacgacggcggtggccaacggtgacctctcccagaaggtgaccgtc
gacgtcgcgggcgagatgctcgagctgaagaacaccgtcaacacgatggtcgaccagctg
tccgccttcggtgccgaagtcacgcgcgtggcacgggagatcggtgtcgagggtgaactc
ggcggccaggcgctcgtcgtgggcgccgccggtacgtggaaagacctcaccgactctgtg
aacacggctttccgtaacctcaccgggcaggtgcggaacatcgcccaggtgacgacggcg
gtggcgaacggcgacctctcccagaaggtcaccgtcgacgtgtccggcgagatgctccag
ctgaagaacaccgtgaacacgatggtcgaccagctgtcgagcttcgccgaccaggtgacc
cgtatggcgcgcgacgtgggcacggagggccgcctcggcggccaggcccgcgtcgacggc
gtgagcggcacctggaaggagctcaccgactccgtcaacttcatggccggcaacctgact
tcacaggtgcggcagatcgctcaggtcaccacggccgtggcgcgcggtgacctctcccag
aagatcgacgtggacgcgcgcggcgagatcctggagctgaagaacaccatcaacacgatg
gtcgaccagctgtccgccttcgcggaccaggtgacccgcgtggcccgcgaggtgggtacg
gaaggccgcctgggcggtcaggcgcaggtgcccggcgtggccggtgtgtggcgcgacctg
accgactcggtgaacggcatggccggcaacctcacggcccaggtgcgcaacatcgcgcag
gtcgccaccgcggtcgcccgcggtgacctgtcgcagaagatcgacgtggacgcgcgcggc
gagatcctggagctgaagaacaccctcaacacgatggtggaccagctctccgcgttcgcc
gagcaggtgacgcgggtgtcccgtgaggtgggtacggacggcatcctcggcgggcaggcc
gaggtgcagggtgtgtcgggtacgtggaaggacctgacgcagtccgtgaacggcatggcg
aacaacctgacccttcaggtgcgcaacatcgccgaggtcactacagccgtagcgcgcggc
gacctgtccaagaagatcaccgtcgacgccaagggcgagatcctcgagctcgtcaccacg
gtgaacacgatggtggaccagctgtcgtcgttcgccgagcaggtgacccgcgtggcccgt
gaggtgggcaccgagggccagctgggcggccaggcgcgcgtcccgggcgtcacgggcatc
tggaaggacctgagcgacaacgtcaacctgatggccaacaacctgaccatgcaggtgcgc
aacatctcgcaggtggccgcggccgtcgccaacggcgacctgacccgcacggtgaccatc
gaggcgcgcggcgaggtcgcacagctcgccgacacgttcaacaccatggtgaagacgctg
agttcgttcgccgaccaggtcaccaaggtggcccgtgaagtgggtacggacggcatcctc
ggcggccaggcccgcgtacccggcgtgtccggtacgtggaaggacctcaccgagtccgtg
aacggcatggcgtcgaacctcaccggccaggtgcgcaacatcgcgatggtcacgacggcc
atcgccaagggcgacctgaccaagaagatcgacatcgacgcgcgcggtgagatcctcgag
ctgaagacgacgatcaacacgatggtcgaccagctgtcctcgttcgccgaggaggtcacg
cgcgtggcccgcgaggtgggcaccgaggggcagctgggcggccaggcacgcgtgcgtgac
gtggacggcacctggcgcgacctcaccgagtccgtgaacgagatggccgggaacctgacc
cgtcaggtgcgcgccatcgcggccgtcgccaccgcggtgacccgcggcgacctcaacctc
aagatcgacgttgacgccgcgggcgagatccaggtcctccaggacaacatcaacaagatg
atctcgaacctgcgcgacaccacgatcgccaacgaggagcaggactggctgaagggcaac
ctggcgcgcatctcgggtctgctccagggccgccgcgacctcgacgacgtggcctcgctg
atcatgagcgagctgacgcccgtggtgtccgcacagcacggcgcgttcttcctggcgctg
cccctcgacgaggccgccgacccggcgaccgccgacgaggacgcgtacgagctgcgcatg
ctgggctcctacggctactcgatggggtccatgccgacctcgttccggcccggcgagacg
ctcatcgggacggccgcccaggagcggcgcacgatcctcgtggacaacgcgcccagcggc
tacctgaagatcgcctccgggctcggggaggcgccgccggcccaggtcgtcgtgatcccc
gtgctcttcgagggcacggtgctcggtgtgatcgagctggcgtcgttcacaccgttcacg
cagatccagaaggacttcctgaaccagatcgccgaaatgatcgcgacgagcgtcaacacg
atctcggtcaactccaagaccgaggtcctgctgaagcagtcgcaggagctgaccgagcag
ctgcgcgagcgctcggccgagctggagaaccggcagaaggccctccaggcgtccaacgcc
gagctggaggagaaggccgagctgctggcccggcagaaccgcgacatcgaggtgaagaac
accgagatcgaggaggcgcggcaggtcctggaggagcgcgccgagcagctcgcggtgtcg
atgcgctacaagagcgagttcctcgccaacatgtcgcacgaactgcgtacgccgctcaac
tcgctgctcatcctggcgaagctgctcgcggacaacgcggacgcgaacctgacgcccaag
caggtcgagttcgccgagacgatccacggggcgggctcggacctgctccagctgatcaac
gacatcctggacctgtcgaaggtcgaggcgggcaagatggacgtgtcgcccacccgcatc
gccctggtgcagctcgtcgactacgtggaggcgacgttccgcccgctgaccgccgagaag
caactcgacttctccgtaagggtctcgccggaactgccgaccaccctgcacaccgacgag
cagcgcctcctccaggtgctgcgcaacctcctgtccaacgcggtgaagttcaccgactcc
ggagcggtggagctcgtcatccggcccgccggcagcgacgtgccccacgcgatccgcgaa
cagctcctggaagcgggctcgttgcaggacgcggacgccgatctgatcgccttctcggtg
accgacaccggcatcggtatcgccggcagcaagatgcgcgtcatcttcgaggcgttcaag
caggccgacggcaccaccagccgcaagtacggcggcaccggactcggcctgtccatcagc
cgggagatcgcccgcctgctgggcggtgagatccacgcggcgagcgagcccggacgcggc
tccacgttcacgctgtacctgccgctgcaccccgccgagctgccgccccaggggtacgcg
cagctggcgccgtccgtggagccggggcgtccgctggccctcgaccccgcgccggagccc
gccgaggcggagaccccggccgaggtgaagtcgtaccaggagacgcagagcggtgcggcc
gcgctcttcaggcggcggcgcaggcacgcgccggcgcccgagcagacgacggacctcggg
gcgcgggcgagcggcgacgggcaacagggccgcgagcgctgggacgcggcgggggaggag
agcgccccgaagccgcggcgcgcgttccagttcggcggcgagaaggtcctcatcgtcgat
gacgacatccgcaacgtgttcgcgctgaccagcgtcctggagcagcacggcctgtcggtc
ctgtacgcggagaacggccgcgagggcatcgaggtcctggagcagcacgacgacgtgacg
gtcgtgctgatggacatcatgatgccggagatggacgggtacgcgacgacgacggcgatc
cggcggatgccccagttcgcggggctgccgatcatcgccctcaccgcgaaggcgatgaag
ggcgaccgggagaaggcgatcgagtcgggggcttccgactatgtgacgaagccggtcgat
cctgatcatctgctcgccgtgatggagcagtggatgcgcggtgagtga
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