KEGG   Streptomyces xanthii: IAG42_09220
Entry
IAG42_09220       CDS       T07861                                 
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
  KO
K03177  tRNA pseudouridine55 synthase [EC:5.4.99.25]
Organism
sxn  Streptomyces xanthii
Brite
KEGG Orthology (KO) [BR:sxn00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:sxn03016]
    IAG42_09220 (truB)
Enzymes [BR:sxn01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.25  tRNA pseudouridine55 synthase
     IAG42_09220 (truB)
Transfer RNA biogenesis [BR:sxn03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    IAG42_09220 (truB)
 Prokaryotic type
    IAG42_09220 (truB)
SSDB
Motif
Pfam: TruB_N TruB_C TruB_C_2 PseudoU_synth_2 DKCLD
Other DBs
NCBI-ProteinID: QNS03790
UniProt: A0A7H1B4Y5
LinkDB
Position
complement(2040099..2041004)
AA seq 301 aa
MSDRTPPPDGLVIVDKPSGFTSHDVVAKMRGIARTRRVGHAGTLDPMATGVLVLGVERAT
KLLGHLALTEKEYLGTIRLGQNTLTDDAEGDITSSTDASGVRRDAVDAGVAKLTGAIMQV
PSKVSAIKINGVRSYKRAREGEDFEIPARPVTVSSFQVYDMRDAVAEDGTPVLDLVVSVV
CSSGTYIRALARDLGADLGVGGHLTALRRTRVGPYKLDGAKTLDQLQESFAVMPVADAAS
AAFPRWEVDARRAKLLLNGVRLEMPAEYAGAGPVGVFGADGTFLALVEESKGKAKSLAVF
G
NT seq 906 nt   +upstreamnt  +downstreamnt
atgtccgaccgcacccctccgcccgacggcctggtcatcgtcgacaagccgtcgggcttc
acctcgcacgacgtcgtggccaagatgcgcgggatcgccaggacccgccgcgtcggccac
gcgggcaccctcgacccgatggcgacgggcgtcctcgtgctcggcgtcgagcgcgccacc
aagctcctcggtcacctcgcgctgaccgagaaggagtacctcggcacgatccggctcggg
cagaacacgctcaccgacgacgccgagggcgacatcacctcctccaccgacgcctccgga
gtgcggcgcgacgccgtcgacgcgggcgtcgccaagctgaccggcgccatcatgcaggtg
ccgtccaaggtcagcgccatcaagatcaacggcgtgcgctcgtacaagcgcgcccgtgag
ggcgaggacttcgagatcccggcccggccggtcaccgtctcctccttccaggtctacgac
atgcgggacgccgtcgccgaggacgggaccccggtgctcgacctcgtggtgtccgtcgtc
tgctcgtccggcacctacatccgggccctcgcccgcgacctcggcgcggacctcggggtc
ggcggccatctgaccgccctgcgccgcacccgcgtcgggccctacaagctcgacggcgcc
aagaccctggaccagctccaggagtccttcgccgtgatgccggtggcggacgccgcgagc
gccgcgttcccgcgctgggaggtcgacgcgcgccgcgccaagctgctcctgaacggggta
cggctcgagatgcccgccgagtacgcgggcgccggtcccgtcggcgtcttcggcgcggac
ggcaccttcctggccctcgtcgaggagtccaagggcaaggcgaagagcctggccgtcttc
ggctga

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