Streptomyces xanthii: IAG42_14365
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Entry
IAG42_14365 CDS
T07861
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
sxn
Streptomyces xanthii
Pathway
sxn03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
sxn00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
IAG42_14365 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sxn03021
]
IAG42_14365 (rpoB)
03400 DNA repair and recombination proteins [BR:
sxn03400
]
IAG42_14365 (rpoB)
Enzymes [BR:
sxn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
IAG42_14365 (rpoB)
Transcription machinery [BR:
sxn03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
IAG42_14365 (rpoB)
DNA repair and recombination proteins [BR:
sxn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
IAG42_14365 (rpoB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_3
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
Motif
Other DBs
NCBI-ProteinID:
QNS04679
UniProt:
A0A7H1B7H4
LinkDB
All DBs
Position
complement(3198003..3201488)
Genome browser
AA seq
1161 aa
AA seq
DB search
MAASRNASTANTNNGASTAPLRISFAKIKEPLEVPNLLALQTESFDWLLGNTAWQSRVEA
ALESGQDVPTKSGLEEIFEEISPIEDFSGSMSLTFRDHRFEPPKNSIDECKERDFTYAAP
LFVTAEFTNNETGEIKSQTVFMGDFPLMTDKGTFVINGTERVVVSQLVRSPGVYFDSSID
KTSDKDIFSAKVIPSRGAWLEMEIDKRDMVGVRIDRKRKQSVTVLLKALGWTTEQILEEF
GQYESMRATLEKDHTQGQDDALLDIYRKLRPGEPPTREAAQTLLENLYFNPKRYDLAKVG
RYKVNKKLGADEPLDAGVLTTDDIIATIKYLVKLHAGETETVSESGREIIVETDDIDHFG
NRRIRNVGELIQNQVRTGLARMERVVRERMTTQDVEAITPQTLINIRPVVASIKEFFGTS
QLSQFMDQNNPLSGLTHKRRLNALGPGGLSRERAGFEVRDVHPSHYGRMCPIETPEGPNI
GLIGSLASYGRINPFGFIETPYRKVVDGVVTDDVDYLTADEEDRFVIAQANAPLNDELRF
VENRVLVRRRGGEVDYVPGTDVDYMDVSPRQMVSVATAMIPFLEHDDANRALMGANMMRQ
AVPLIKSEAPLVGTGMEYRCATDAGDVLKAEKDGVVQEVSADYITITNDDGTYTTYRLHK
FSRSNQGTSVNQKVVVDEGQRIIAGQVLADGPATEEGEMALGKNLLVAFMPWEGHNYEDA
IILSQRLVQDDVLSSIHIEEHEVDARDTKLGPEEITRDIPNVSEEVLADLDERGIIRIGA
EVVAGDILVGKVTPKGETELTPEERLLRAIFGEKAREVRDTSLKVPHGEIGKVIGVRVFD
REEGDELPPGVNQLVRVYVAQKRKITDGDKLAGRHGNKGVISKINPIEDMPFLEDGTPVD
IILNPLGVPSRMNPGQVLEIHLGWLASQGWDVSGLGDEWAKRLQAIGADKVEPRTNVATP
VFDGAREDELAGLLEHTIPNRDGDRMVLPTGKARLFDGRSGEPFPDPISVGYMYILKLHH
LVDDKLHARSTGPYSMITQQPLGGKAQFGGQRFGEMEVWALEAYGAAYALQELLTIKSDD
VTGRVKVYEAIVKGENIPEPGIPESFKVLIKEMQSLCLNVEVLSSDGMSIEMRDTDEDVF
RAAEELGIDLSRREPSSVEEV
NT seq
3486 nt
NT seq
+upstream
nt +downstream
nt
ttggccgcctcgcgcaacgcctcgaccgcgaatacgaacaatggcgcaagcaccgccccg
ctgcgcatctcctttgcaaagatcaaggagcccctcgaggttccgaacctgctcgcgctg
cagaccgagagctttgactggctgctcggcaacaccgcctggcagagtcgggtcgaggcg
gctctggagtccggtcaggacgtccccaccaagtccggcctcgaggagatcttcgaggag
atctccccgatcgaggacttctccgggtcgatgtccctgacgttccgcgaccaccgcttc
gagcctccgaagaactcgatcgacgagtgcaaggagcgcgacttcacgtacgccgccccg
ctcttcgtcaccgccgagttcacgaacaacgagacgggcgagatcaagtcccagaccgtc
ttcatgggcgacttcccgctcatgacggacaagggcaccttcgtcatcaacggcaccgag
cgtgtcgtcgtctcgcagctcgtccgctcgcccggtgtctacttcgactcctccatcgac
aagacgtccgacaaggacatcttctcggccaaggtcatcccctcgcgtggtgcctggctg
gagatggagatcgacaagcgcgacatggtcggtgtgcgcatcgaccgcaagcgcaagcag
tccgtcaccgtcctgctcaaggctctcggttggacgaccgagcagatcctcgaggagttc
ggccagtacgagtccatgcgcgccaccctggagaaggaccacacccagggccaggacgac
gcgctgctcgacatctaccgcaagctgcgtccgggcgagccgccgacccgtgaggccgcg
cagacgctgctcgagaacctctacttcaacccgaagcgctacgacctcgcgaaggtcggc
cgctacaaggtgaacaagaagctcggcgcggacgagccgctggacgccggcgtcctcacc
accgacgacatcatcgccaccatcaagtacctggtgaagctgcacgccggtgagaccgag
acggtctccgagtcgggccgcgagatcatcgtcgagaccgacgacatcgaccacttcggc
aaccgccgtatccgtaacgtcggtgagctgatccagaaccaggtccgtacgggtctcgcc
cgtatggagcgcgtcgtgcgcgagcgcatgacgacccaggacgtcgaggcgatcacgccg
cagaccctgatcaacatccgccccgtggtggcgtcgatcaaggagttcttcggcacctcc
cagctgtcccagttcatggaccagaacaacccgctgtcggggctgacgcacaagcgtcgt
ctgaacgccctcggcccgggtggtctgtcccgtgagcgggccggcttcgaggtccgagac
gtgcacccgtcgcactacggccgcatgtgcccgatcgagacgcccgaaggcccgaacatc
ggtctgatcggctcgctcgcctcgtacggccggatcaacccgttcggcttcatcgagacg
ccgtaccgcaaggtcgtcgacggtgtcgtcaccgacgacgtcgactacctgacggccgac
gaggaagaccgcttcgtcatcgcgcaggccaacgcgccgctcaacgacgagctccgcttc
gtcgagaaccgcgtgctggtccgccgtcgtggtggcgaggtcgactacgtgcccggcacg
gacgtcgactacatggacgtctccccgcgccagatggtgtcggtcgcgaccgccatgatc
cccttcctcgagcacgacgacgccaaccgtgccctcatgggcgcgaacatgatgcgtcag
gcggtgccgctgattaagtcggaggccccgctcgtcggcaccggcatggagtaccgctgc
gccaccgacgccggtgacgtgctcaaggccgagaaggacggtgtggtccaggaggtctcc
gcggactacatcaccatcaccaacgacgacggcacgtacaccacgtaccgcctgcacaag
ttctcgcgctccaaccagggcacctctgtgaaccagaaggtcgtcgtggacgagggtcag
cggatcatcgccggccaggtgctggccgacggtcccgcgaccgaagagggcgagatggcc
ctcggcaagaacctgctcgtcgcgttcatgccctgggaaggtcacaactacgaggacgcg
atcatcctgtcgcagcgcctcgtgcaggacgacgtcctctcctcgatccacatcgaggag
cacgaggtcgacgcccgtgacaccaagctgggccccgaggagatcacccgggacatcccg
aacgtctcggaggaggtcctcgccgacctcgacgagcgcggcatcatccgtatcggtgcc
gaggtcgtcgccggcgacatcctcgtcggcaaggtcacgcccaagggtgagaccgagctg
acccccgaggagcgcctgctccgcgcgatcttcggtgagaaggcgcgcgaggtgcgcgac
acctcgctgaaggtgccgcacggtgagatcggcaaggtcatcggtgtccgcgtcttcgac
cgcgaagagggcgacgagctgccgccgggcgtgaaccagctggttcgtgtctacgtcgcg
cagaagcgcaagatcaccgatggtgacaagctcgccggccgtcacggcaacaagggcgtc
atctcgaagatcaacccgatcgaggacatgccgttcctggaggacggcaccccggtcgac
atcatcctcaacccgctgggtgtcccgtcccgaatgaacccgggacaggtcctggagatc
cacctcggctggctcgccagccagggctgggacgtctccggtctcggcgacgagtgggcc
aagcgcctccaggcgatcggcgccgacaaggtcgagccgcgtaccaacgtcgcgaccccg
gtcttcgacggtgcccgcgaggacgagctggccggtctgctcgagcacaccatcccgaac
cgggacggcgaccgcatggtcctgcccaccggtaaggcgcggctgttcgacggccgttcc
ggtgagccgttcccggacccgatctcggtcgggtacatgtacatcctcaagctccaccac
ctggtcgacgacaagctgcacgcccggtcgaccggtccgtactcgatgatcacccagcag
ccgctgggtggtaaggcccagttcggtggccagcgcttcggtgagatggaggtgtgggcg
ctggaggcgtacggcgccgcttacgccctccaggagctgctgaccatcaagtccgacgac
gtcaccggccgcgtgaaggtctacgaggccatcgtcaagggcgagaacatccctgagccc
ggcattcccgagtccttcaaggtgctcatcaaggaaatgcagtccctgtgcctcaacgtg
gaggtgctgtcctcggacggcatgtccatcgagatgcgcgacaccgacgaggacgtcttc
cgcgcagcggaggagctcggcatcgacctgtcgcggcgcgagccgagcagcgtcgaagag
gtctga
DBGET
integrated database retrieval system
