Streptomyces xanthii: IAG42_21035
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Entry
IAG42_21035 CDS
T07861
Name
(GenBank) RNA polymerase sigma factor SigF
KO
K03090
RNA polymerase sigma-B factor
Organism
sxn
Streptomyces xanthii
Brite
KEGG Orthology (KO) [BR:
sxn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sxn03021
]
IAG42_21035
Transcription machinery [BR:
sxn03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
IAG42_21035
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r3
Sigma70_r2
Sigma70_r4_2
HTH_Crp_2
HTH_23
HTH_24
MarR_2
Sigma70_ECF
HTH_3
DUF7343
MarR
IF2_N
HTH_20
Apolipoprotein
Motif
Other DBs
NCBI-ProteinID:
QNS05824
UniProt:
A0A7H1BAR9
LinkDB
All DBs
Position
complement(4629773..4630669)
Genome browser
AA seq
298 aa
AA seq
DB search
MSPRLDESRTDQASSKLPPESPAHVESDVLEDLGLPEIPPFDEVAPLDARALSKTLFERL
ESLEEGTHEYSYVRNTLVELNLALVKFAASRFRSRSEPMEDIIQVGTIGLIKAIDRFELS
RGVEFPTFAMPTIVGEIKRFFRDTSWSVRVPRRLQELRLDLAKAGDELAQQLDRAPTVGE
LADRLGISNDEVVEGMAASNAYTASSLDAQPEEDDSEGALADRIGYEDHGLEGIEYVESL
KPLIAELPPRDRKILSLRFVANMTQSEIGEELGISQMHVSRLLSRTLVRLRKGLTVEE
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
atgtcaccccggctcgacgaatcgcgtactgaccaggcgtcgtcgaaactccccccggaa
tcccctgcccacgtcgagtccgacgtcctggaggacctcggtcttccggagatcccgccc
ttcgacgaagtggcaccactcgacgcgcgcgccctctccaagacactcttcgaacgtctg
gagtcccttgaagaaggcacgcacgaatactcgtacgtccgcaacaccctggtcgagctg
aacctcgccctggtgaagttcgcggcctcccggttccgctcacgcagcgaaccgatggag
gacatcatccaggtcggcaccatcggcctcatcaaggccatcgaccgcttcgagctcagc
cgcggcgtcgagttccccaccttcgcaatgccgaccatcgtcggcgagataaagcgattc
ttccgcgacacctcgtggtccgtgcgcgtcccgcgcaggctccaggagctccgtctcgac
ctcgccaaggccggcgacgaactcgcccagcagctcgaccgcgcccccaccgtgggcgag
ctggccgaccgcctcggcatctccaacgacgaggtcgtcgagggcatggcggcgtccaac
gcctacactgcctcgtccctggacgcccagcccgaggaggacgactccgagggcgcgctc
gcggaccgcatcggctacgaggaccacggcctggagggcatcgagtacgtcgagtccctc
aagcccctcatcgccgaactcccgccgcgcgaccggaagatcctgtcgctgcgcttcgtc
gccaacatgacccagtcggagatcggcgaagaactcggaatctcgcagatgcacgtgtcg
cggctcctgtcgcggaccctcgtgcgcctgcgcaaggggctgaccgtcgaggagtga
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