Streptomyces xanthii: IAG42_23865
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Entry
IAG42_23865 CDS
T07861
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
sxn
Streptomyces xanthii
Pathway
sxn03030
DNA replication
sxn03430
Mismatch repair
sxn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sxn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
IAG42_23865 (holA)
03430 Mismatch repair
IAG42_23865 (holA)
03440 Homologous recombination
IAG42_23865 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sxn03032
]
IAG42_23865 (holA)
03400 DNA repair and recombination proteins [BR:
sxn03400
]
IAG42_23865 (holA)
Enzymes [BR:
sxn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
IAG42_23865 (holA)
DNA replication proteins [BR:
sxn03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
IAG42_23865 (holA)
DNA repair and recombination proteins [BR:
sxn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
IAG42_23865 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta_C
DNA_pol3_delta
DNA_pol3_gamma3
Motif
Other DBs
NCBI-ProteinID:
QNS06315
UniProt:
A0A7H1BC60
LinkDB
All DBs
Position
5293563..5294546
Genome browser
AA seq
327 aa
AA seq
DB search
MARKTANDDPLAPLTVAVGQEDLLLDRAVQQVVAAARAADADTDVRDLTPDQLQPGTLAE
LTSPSLFAERKVVVVRNAQDLSADTVKDVKAYIGSPAEEITLVLLHAGGAKGKGLLDAAR
KAGAREVACPKMTKPADRLAFVRAEFRALGRSATPEACQALVDAIGSDLRELASAVTQLG
ADVEGTIDEAVVGRYYTGRAEASSFTVADRAVEGRAAEALEALRWSLATGVAPVMITSAL
AQGVRAIGKLSSARGGRPADLARELGMPPWKIDRVRQQMRGWTPDGVAAALRAVAEADAG
VKGGGDDPGYALEKAVVAVARAARARG
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atggccaggaagactgcaaacgacgatccgctcgctccgctcaccgtcgcggtgggccag
gaggacctgctgctcgaccgcgcggtgcagcaggtggtcgccgccgcgcgcgcggccgat
gccgacaccgacgtgcgcgacctcacccccgaccagctgcagcccggcacgctggccgag
ctgacgagcccgtcgctgttcgccgagcgcaaggtcgtcgtcgtacgcaatgcgcaggac
ctgtcggcggacacggtcaaggacgtgaaggcgtacatcggttcgcccgccgaggagatc
acgctcgtcctgctgcacgcgggcggcgccaagggcaaggggctgctcgacgcggcgcgc
aaggcgggggcccgggaggtcgcctgcccgaagatgacgaagccggcggaccggctggcg
ttcgtgcgcgcggagttccgggcgctcgggcggtccgcgacaccggaagcctgccaggcg
ctcgtcgacgcgatcggcagcgacctgcgcgagctggcctccgccgtcacgcagttgggg
gccgacgtcgagggcaccatcgacgaggccgtcgtcgggcggtactacacggggcgggcc
gaggcgtccagcttcaccgtggccgaccgagccgtggaagggcgggcggccgaggccctg
gaggcgttgcggtggtcgctcgcgaccggggtcgcgcccgtgatgatcaccagcgcgctg
gcccagggggtgcgggcgatcgggaagctgtcgtccgcgcggggtgggcggcccgcggat
ctggcgcgggagctggggatgccgccctggaagatcgatcgggtgcggcagcagatgcgg
gggtggactccggacggggtcgctgccgcgttgcgggctgtggcggaggccgatgcgggg
gtcaaggggggcggggacgatcccgggtacgccttggagaaggccgtcgtggctgttgct
cgggccgctcgggctcgggggtag
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