Streptomyces xanthii: IAG42_26320
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Entry
IAG42_26320 CDS
T07861
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
sxn
Streptomyces xanthii
Pathway
sxn03030
DNA replication
sxn03430
Mismatch repair
sxn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sxn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
IAG42_26320 (dnaE)
03430 Mismatch repair
IAG42_26320 (dnaE)
03440 Homologous recombination
IAG42_26320 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sxn03032
]
IAG42_26320 (dnaE)
03400 DNA repair and recombination proteins [BR:
sxn03400
]
IAG42_26320 (dnaE)
Enzymes [BR:
sxn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
IAG42_26320 (dnaE)
DNA replication proteins [BR:
sxn03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
IAG42_26320 (dnaE)
DNA repair and recombination proteins [BR:
sxn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
IAG42_26320 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DUF655
Motif
Other DBs
NCBI-ProteinID:
QNS06752
UniProt:
A0A7H1BDE7
LinkDB
All DBs
Position
5840403..5843942
Genome browser
AA seq
1179 aa
AA seq
DB search
MSKPPFTHLHVHTQYSLLDGAARLKDMFKACNDMGMTHIAMSDHGNLHGAYDFFHTAQKA
GVTPIIGIEAYVAPESRRNKRKIQWGQPHQKRDDVSGSGGYTHKTIWAANKTGLHNLFKL
SSDAYAEGWLQKWPRMDKETISQWSEGLIASTGCPSGELQTRLRLGQYDEALKAASEYQD
IFGKDRYFLELMDHGIEIERRVRDGLLDIGKKLGIPPLVTNDSHYTYAHEATAHDALLCI
QTGKNLSDPDRFRFDGTGYYLKSTDEMYAVDSSDAWQEGCRNTLLVAEQIDTTGMFEKRD
LMPKFEIPDGFTEVTWFQEEVRRGMERRYPGGVPEDRQKQAEYEMDIIIQMGFPGYFLVV
ADFIMWAKNNGIAVGPGRGSAAGSIVAYAMGITDLDPITHGLIFERFLNPERVSMPDVDI
DFDERRRVEVIRYVTEKYGADKVAMIGTYGKIKAKNAIKDSARVLGYPYAMGDRLTKAMP
ADVLGKGIDLDGITNPTHPRYSEAGEIRGMYENEPDVKKVIDTAKGVEGLVRQMGVHAAG
VIMSSEPIVDHAPIWVRHTDGVTITQWDYPQCESLGLLKMDFLGLRNLTIMDDAVKMVKS
NKGIDLEMLSLPLDDPKTFELLCRGDTLGVFQFDGGPMRSLLRQMQPDNFEDISAVSALY
RPGPMGMNSHTNYAERKNGRQEITPIHPELEEPLKETLGLTYGLIVYQEQVQKAAQIIAG
YSLGEADILRRVMGKKKPEELAKNFVLFQEGAKKNGYSDAAIQALWDVLVPFAGYAFNKA
HSSAYGLVTYWTAYLKANYPAEYMAALLTSVKDDKDKSAVYLNECRRMGIKVLPPDVNES
VHNFAAQGDDVILFGLEAVRNVGTNVVDSIIRARKAKGKYSSFPDYLDKIEAAACNKRTT
ESLIKAGAFDSLQHTRKGLTAQYEPMIDNVVAVKRKEAEGQFDLFGGMGEEDSDEPGFGL
DVEFSTDEWDKTYLLAQEREMLGLYVSDHPLFGLEHVLSDKADAGIGQLTGGDYSDGSVV
TVGGIISGLQRKMTKQGNAWAIATVEDLAGSIECMFFPATYQLVSTQLVEDAVVFVKGRL
DKREDVPRLVAMEMQVPDLSNAGTNAPVILTIPALKVTPPMVSRLGEILSNHRGDSEVRI
KLQGPRKTTVLRLDRHRVKPDPALYGDLKVLLGPSCLAG
NT seq
3540 nt
NT seq
+upstream
nt +downstream
nt
gtgtcaaagccgcccttcacgcacctgcacgtccacacccagtactcgctgctggacggt
gccgcgcggctgaaggacatgttcaaggcgtgcaacgacatgggcatgacgcacatcgcc
atgtccgaccacggcaacctccacggggcgtacgacttcttccacaccgcccagaaggcg
ggcgtcacgccgatcatcggcatcgaggcctacgtggccccggagtcccggcgcaacaag
cggaagatccagtggggccagccgcaccagaagcgcgacgacgtctcgggttcgggtggt
tacacccacaagacgatctgggcggcgaacaagacggggctgcacaacctcttcaagctc
tcctcggacgcgtacgccgagggctggctgcagaagtggccccgtatggacaaggagacg
atctcccagtggagcgagggcctcatcgcctccaccggctgcccctccggtgagctccag
acccggctgcgcctcggccagtacgacgaggccctgaaggccgcctccgagtaccaggac
atcttcggcaaggaccggtacttcctggagctgatggaccacggcatcgagatcgagcgc
cgggtccgcgacggtctgctcgacatcggcaagaagctcggcatcccgcccctggtgacg
aacgactcgcactacacgtacgcgcacgaggcgaccgcccacgacgccctgctgtgcatc
cagaccggcaagaacctctcggaccccgaccgcttccgcttcgacggcaccggctactac
ctgaagtcgaccgacgagatgtacgccgtcgactcctcggacgcctggcaggagggctgc
cgcaacacgctcctggtggccgagcagatcgacaccaccggcatgttcgagaagcgcgac
ctcatgccgaagttcgagatcccggacggcttcaccgaggtcacctggttccaggaggag
gtccgccgcggcatggagcgccgctacccgggcggcgtccccgaggaccgccagaagcag
gccgagtacgagatggacatcatcatccagatggggttcccggggtacttcctggtcgtc
gccgacttcatcatgtgggcgaagaacaacggcatcgcggtgggccccggccgaggctcc
gcggccggctcgatcgtcgcgtacgccatgggcatcaccgacctcgacccgatcacccac
ggcctgatcttcgaacggttcctcaaccccgagcgcgtctccatgcccgacgtcgacatc
gacttcgacgagcgcaggcgcgtcgaggtgatcaggtacgtgaccgagaagtacggcgcc
gacaaggtcgccatgatcggcacctacggcaagatcaaggccaagaacgcgatcaaggac
tccgcgcgcgtgctcggctacccgtacgcgatgggcgaccgcctcaccaaggcgatgccc
gccgacgtcctcggcaagggcatcgacctcgacggcatcaccaaccccacgcacccgcgc
tacagcgaggcgggcgagatccgcgggatgtacgagaacgagccggacgtcaagaaggtc
atcgacaccgccaagggcgtcgagggcctggtccggcagatgggcgtgcacgccgccggc
gtcatcatgtccagcgagcccatcgtcgaccacgccccgatctgggtgcggcacaccgac
ggtgtcaccatcacgcagtgggactacccgcagtgcgagtcgctcggtctgctgaagatg
gacttcctcggcctgcgcaacctgacgatcatggacgacgccgtcaagatggtgaagtcc
aacaagggcatcgacctggagatgctctcgctcccgctcgacgacccgaagaccttcgaa
ctgctctgccgcggtgacacgctcggcgtcttccagttcgacggcggccccatgcgctcc
ctgctgcgccagatgcagcccgacaacttcgaggacatttccgccgtctcggccctgtac
cggccgggcccgatgggcatgaactcgcacacgaactacgcggagcgcaagaacggccgg
caggagatcacgccgatccacccggagctcgaagagcccctgaaggagacgctcggcctg
acctacggcctcatcgtgtaccaggagcaggtgcagaaggccgcccagatcatcgccggg
tactcgctcggcgaggccgacatcctgcgccgcgtgatgggcaagaagaagcccgaggaa
ctggccaagaacttcgtcctcttccaggagggcgcgaagaagaacggctactcggacgcc
gcgatccaggccctgtgggacgtgctggtccccttcgccggctacgcgttcaacaaggcg
cactcctccgcgtacggcctggtcacctactggaccgcgtacctgaaggcgaactacccg
gccgagtacatggccgcgctgctcacctccgtgaaggacgacaaggacaagtcggccgtc
tatctgaacgagtgccggcgcatgggcatcaaggtgctcccgccggacgtcaacgagtcg
gtgcacaacttcgcggcccagggcgacgacgtgatcctcttcggcctcgaagcggtccgc
aacgtcggcaccaacgtggtcgactcgatcatccgggcccgcaaggccaaggggaagtac
tcctcgttccccgactacctggacaagatcgaggccgccgcctgcaacaagcgcaccacc
gagtcgctcatcaaggccggcgccttcgacagcctccagcacacgcgcaagggcctcacc
gcccagtacgagccgatgatcgacaacgtggtcgcggtcaagcgcaaggaggccgagggc
cagttcgacctcttcggcggcatgggggaggaggacagcgacgagcccggcttcggcctc
gacgtcgagttctccaccgacgagtgggacaagacgtacctgctcgcccaggagcgcgag
atgctcggcctctacgtctccgaccacccgctgttcggcctcgagcacgtgctgtccgac
aaggccgacgcgggcatcggccagctcaccggcggcgactactccgacggctccgtcgtc
accgtcggcggcatcatctcgggcctccagcgcaagatgaccaagcagggaaacgcctgg
gcgatcgccaccgtcgaggacctcgccggctccatcgagtgcatgttcttcccggcgacc
taccagctggtgtccacccagctcgtcgaggacgccgtcgtcttcgtcaagggccgcctc
gacaagcgcgaggacgtgccgcgcctggtcgccatggagatgcaggtccccgacctgtcg
aacgcgggcaccaacgcgccggtgatcctcaccatccccgccctcaaggtgaccccgccg
atggtcagccgcctcggcgagatcctctccaaccaccggggcgacagcgaggtccgcatc
aagctccagggcccccgcaagaccaccgtgctccggctcgaccggcaccgggtcaagccc
gaccccgcgctctacggcgacctgaaggtgctgctcggcccgtcctgcctggccggctga
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