Streptomyces xanthii: IAG42_36065
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Entry
IAG42_36065 CDS
T07861
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
sxn
Streptomyces xanthii
Pathway
sxn00521
Streptomycin biosynthesis
sxn00523
Polyketide sugar unit biosynthesis
sxn00525
Acarbose and validamycin biosynthesis
sxn00541
Biosynthesis of various nucleotide sugars
sxn01055
Biosynthesis of vancomycin group antibiotics
sxn01100
Metabolic pathways
sxn01110
Biosynthesis of secondary metabolites
sxn01250
Biosynthesis of nucleotide sugars
Module
sxn_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
sxn00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
IAG42_36065 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
IAG42_36065 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
IAG42_36065 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
IAG42_36065 (rfbB)
00525 Acarbose and validamycin biosynthesis
IAG42_36065 (rfbB)
Enzymes [BR:
sxn01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
IAG42_36065 (rfbB)
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Motif
Pfam:
GDP_Man_Dehyd
Epimerase
3Beta_HSD
Polysacc_synt_2
RmlD_sub_bind
NAD_binding_4
NAD_binding_10
NmrA
adh_short
Motif
Other DBs
NCBI-ProteinID:
QNS09182
UniProt:
A0A7H1BKC7
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All DBs
Position
unnamed1:complement(41030..42040)
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AA seq
336 aa
AA seq
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MRVLVTGGAGFIGSHFVRELLSGTYPSLEPTRVVVLDALTYAGNRANLDPVAADPRLEFV
QGDICDAPLVARLFAGTDLVVHFAAESHVDRSIEDSSAFVHTNVLGTQTLLQEAVRAGVG
RFVHVSTDEVYGSIETGSWDEEEPLLPNSPYAASKASSDLIALAVHRTHGLEVCVTRCSN
NYGPYQFPEKAIPLFTTNLVDGLDVPLYGDGGNSRDWLHVDDHCRGIALVAAKGRPGEIY
NIGGGTELTNRELTGRLLDLCGRDTSAVRQVADRAAHDRRYSVDITKISTELGYAPQVPF
DQGLADTVAWYRDNRAWWEPLKARTAQERAAGSRAH
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgtcctggtcaccggaggtgcgggcttcatcggctcgcacttcgtcagagagctg
ctgtccggcacctacccgagcctggagcccacccgggtggtggtgctggacgcgctcacc
tacgccggcaaccgcgccaacctcgacccggtggccgccgacccgcgcctggagttcgta
cagggggacatctgcgacgccccgctcgtcgcccggctgttcgccggcaccgacctggtg
gtccacttcgccgccgaatcccacgtggaccgctccatcgaggactcctcggccttcgtg
cacaccaacgtcctcggcacacagaccctgctgcaggaggccgtacgggccggcgtgggc
cgcttcgtccacgtgtccaccgacgaggtgtacggatccatcgagaccggctcctgggac
gaggaggaaccgctgctgcccaactccccctacgcggcgtccaaggcctcctccgacctc
atcgcgctcgccgtccaccgcacccacggcctcgaggtctgcgtgacccgctgctccaac
aactacgggccctaccagttccccgagaaggccatccctctcttcaccaccaacctggtc
gacggcctcgacgtccccctctacggagacggcggcaacagccgggactggctgcacgtg
gacgaccactgccgcggcatcgccctggtcgccgccaagggccgccccggcgagatctac
aacatcggcggcggcaccgaactgaccaaccgtgagctcaccgggcggctgctcgacctg
tgcgggcgcgacacctcggcggtgcgacaggtcgcggaccgggccgcgcacgaccgccgc
tactcggtggacatcaccaagatatccacggagctcggctacgccccccaggtcccgttc
gaccagggcctggccgacaccgtggcctggtaccgcgacaaccgcgcctggtgggagccg
ctcaaggcccgcaccgcacaggagcgggcggcaggcagccgtgcgcattga
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