Staphylococcus xylosus C2a: SXYL_00812
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Entry
SXYL_00812 CDS
T03742
Symbol
rho
Name
(GenBank) Transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
sxo
Staphylococcus xylosus C2a
Pathway
sxo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sxo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SXYL_00812 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sxo03021
]
SXYL_00812 (rho)
03019 Messenger RNA biogenesis [BR:
sxo03019
]
SXYL_00812 (rho)
Transcription machinery [BR:
sxo03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
SXYL_00812 (rho)
Messenger RNA biogenesis [BR:
sxo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
SXYL_00812 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
NACHT
OB_RNB
S1CSD-TOTE-2
AAA_24
AAA
Mor
AAA_25
YopJ_bacilli
Motif
Other DBs
NCBI-ProteinID:
CEF18233
UniProt:
A0A5R9AZN2
LinkDB
All DBs
Position
Chr1:869511..870827
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AA seq
438 aa
AA seq
DB search
MPEKVRTSPQYESFHELYKNYTTKDLTQKAKSLKLTNYSKLNKKELVLAIMEAQMEKDGN
YYMEGILDDIQQDGYGFLRTVNYSKGEKDIYISASQIRRFEIKRGDKVTGKVRKPKDNEK
YYGLLQVDFVNGENAEEVKKRPHFQALTPLYPEERILLETTKQNFSTRIMDLVTPIGLGQ
RGLIVAPPKAGKTSLLKEIANAIAINKPDAELFVLLVGERPEEVTDIERSVESAEVVHST
FDEPPQHHVKVAELLLERAKRLVEIGKDVIILMDSITRLARAYNLVIPPSGRTLSGGLDP
ASLHKPKAFFGAARNIEAGGSMTILATALVDTGSRMDDMIYEEFKGTGNMELHLDRKLAE
RRVFPAIDIGRSSTRKEELLIDSKELESLWQLRNMFTDSTDFTERFVRKLKRTDNNKEFF
EQLQKAAKESTKTGKPII
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaaaaagtacgaacatcacctcagtatgaatcgttccacgaattgtacaaaaat
tacactacaaaagatctcactcaaaaagcaaaatctctaaaactaacaaattatagtaaa
ttgaataaaaaagaacttgttcttgccattatggaagcacaaatggaaaaagatggtaac
tattatatggaaggtattttagatgatatccaacaagatggttatggtttcctaagaaca
gttaattattctaagggtgaaaaagacatttatatttctgctagtcaaattcgtcgtttt
gaaattaaacgcggagataaagtgactggtaaagtgagaaagcctaaagataatgaaaaa
tactatggtttattacaagttgatttcgtaaatggtgagaatgcagaagaagttaaaaag
cgtccgcatttccaagcgctgacaccgttatatcctgaagagcgcattttattagaaaca
acaaaacaaaacttctcaacgcgcataatggatttagtaacacctattggtttaggacaa
cgtggtttaatcgttgccccaccaaaagctggtaaaacatcattgcttaaggaaattgca
aatgcaattgcgataaataaaccagatgcagagttatttgtgttgcttgttggagaaaga
cctgaagaggttacagatatagagagatcagtcgaatctgcagaagtagtacactctaca
tttgacgaaccaccacaacaccatgtaaaagttgcagaattattattagaacgtgcaaaa
cgtctagtagaaattggtaaagatgtcatcattttaatggattcaattactaggttagct
cgtgcttataatcttgtaattccaccaagtggtcgtacattatctggtggtttagatcct
gcatccttacacaaacctaaagctttcttcggggctgccagaaatattgaagcgggtggt
agtatgacaattttagctactgctctagtagatactggttctcgaatggatgatatgatt
tatgaggaatttaaaggtacaggaaatatggaattacatctagatcgtaaattagctgaa
cgtcgtgtattcccagcaatcgatataggtcgtagttctacacgtaaagaagaattgcta
atagattcaaaagaacttgagtcattgtggcaattacgtaatatgtttacggattctaca
gattttacagaaagattcgtgcgtaaactgaaacgtacagataacaacaaagaattcttt
gaacagttacaaaaagctgctaaagaaagcactaaaacaggtaaaccaattatttaa
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