KEGG   Staphylococcus xylosus C2a: SXYL_01097
Entry
SXYL_01097        CDS       T03742                                 
Symbol
ribD
Name
(GenBank) Riboflavin biosynthesis protein RibD
  KO
K11752  diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
Organism
sxo  Staphylococcus xylosus C2a
Pathway
sxo00740  Riboflavin metabolism
sxo01100  Metabolic pathways
sxo01110  Biosynthesis of secondary metabolites
sxo01240  Biosynthesis of cofactors
sxo02024  Quorum sensing
Module
sxo_M00125  Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD
Brite
KEGG Orthology (KO) [BR:sxo00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00740 Riboflavin metabolism
    SXYL_01097 (ribD)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    SXYL_01097 (ribD)
Enzymes [BR:sxo01000]
 1. Oxidoreductases
  1.1  Acting on the CH-OH group of donors
   1.1.1  With NAD+ or NADP+ as acceptor
    1.1.1.193  5-amino-6-(5-phosphoribosylamino)uracil reductase
     SXYL_01097 (ribD)
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.4  In cyclic amidines
    3.5.4.26  diaminohydroxyphosphoribosylaminopyrimidine deaminase
     SXYL_01097 (ribD)
SSDB
Motif
Pfam: RibD_C dCMP_cyt_deam_1 MafB19-deam DoxA Inv-AAD
Other DBs
NCBI-ProteinID: CEF18481
UniProt: C6ZDI2
LinkDB
Position
Chr1:1127312..1128355
AA seq 347 aa
MSHYLNYAIQLAKMVEGQTGLNPPVGSVVVNDGRIVGMGAHLQKGGKHAEVQALDMAQDN
ARGGTIYISLEPCTHYGSTPPCVNKIIEAGIKKVVYAVKDTTLPSEGDDILEQAGIEVIF
RSQSDAESLYRDFFMAKNESIPEVTVKVSCSLDGKQATDKGESKWITNKAVKNDVFHLRH
KHDAVLTGRGTIHADNPQYTTRIEEGKHPIKVILSKTGEIDFNLDIFQLRNEPIWIYTQN
KNLKTNIEHVEIIALTDCSIENILKDLYQRGIGSVLVEAGPTVTSEFLESKFTNELILYY
APKIIGGSGNYQFFQSESIFNLSEVPQFEIVNSQMLEQNIKLELRKK
NT seq 1044 nt   +upstreamnt  +downstreamnt
atgagtcattatttgaattacgctattcaattagcaaaaatggtagaaggccaaacgggt
ttgaacccaccagttggatctgtagtagtaaatgatgggcgcattgttggcatgggagcc
catttgcaaaaaggtggcaagcatgctgaagtacaagctttagatatggctcaagacaat
gctagaggtggaactatatatatttcgcttgaaccatgtacacattatggttcgacaccc
ccatgtgtaaataaaatcattgaagcgggtattaaaaaggttgtctatgcggttaaagac
acaacattaccatctgaaggcgatgatatattagaacaggcaggtatcgaagtgatattc
cgctctcaatcagatgcagaatcactatacagagatttctttatggctaagaatgaatcc
attccagaagttacagttaaagtttcatgtagtcttgatggcaaacaagccactgataaa
ggcgaaagtaaatggattactaataaagccgtgaaaaatgatgtgtttcacctacgtcat
aagcacgatgcagtcttgactggtagaggaacgatacatgcagataatccacaatacact
acacgtattgaagaaggtaagcatcctataaaagtcatcttatctaaaactggtgaaatt
gattttaatttagatatttttcaattaagaaatgaaccaatatggatttatactcaaaac
aaaaatttaaaaacaaatattgaacatgtagaaatcatagcattaactgattgttcaatt
gaaaatatattaaaagatttatatcaaagaggaattggaagtgtgctagttgaggcaggg
cccacagtaacttctgaatttctggaatctaaatttacgaacgaactaatcttatattat
gccccgaaaataataggtggttctggtaattatcaatttttccaaagtgaaagcattttt
aatctatcagaagtaccacagtttgaaattgtaaattcacaaatgcttgagcaaaatatt
aaactagagttacgaaagaagtga

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