Staphylococcus xylosus C2a: SXYL_01219
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Entry
SXYL_01219 CDS
T03742
Symbol
ruvB
Name
(GenBank) Holliday junction ATP-dependent DNA helicase ruvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
sxo
Staphylococcus xylosus C2a
Pathway
sxo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sxo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
SXYL_01219 (ruvB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sxo03400
]
SXYL_01219 (ruvB)
Enzymes [BR:
sxo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SXYL_01219 (ruvB)
DNA repair and recombination proteins [BR:
sxo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
SXYL_01219 (ruvB)
RecFOR pathway proteins
SXYL_01219 (ruvB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
Mg_chelatase
AAA_14
bpMoxR
AAA_22
DUF815
AAA_3
AAA_16
nSTAND3
Sigma54_activ_2
RNA_helicase
AAA_18
TIP49
RsgA_GTPase
NB-ARC
ABC_tran
NTPase_1
TsaE
Rad17
AAA_28
AAA_17
Bac_DnaA
Motif
Other DBs
NCBI-ProteinID:
CEF18603
LinkDB
All DBs
Position
Chr1:1264048..1265052
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AA seq
334 aa
AA seq
DB search
MDDRMVDQSIHDEESSFEFSLRPTKLRQYIGQSTIKSNLEVFIKAAKIRQEPLDHVLLFG
PPGLGKTTLSNIIANEMDVNIRTISGPSIERPGDLAAILSSLQPGDVLFIDEIHRLSSVV
EEVLYPAMEDFFLDIVIGKGEEARSIRIDLPPFTLIGATTRAGSLTAPLRDRFGVHLRLE
YYKEHELKEIIVRTAEVLGTSIDDDSAIELAKRSRGTPRVANRLLKRVRDFQQVNDDESI
CIETTKASLQLLQVDDEGLDYIDHKMMNCILEQYKGGPVGLDTIAVSIGEERITIEDVYE
PFLIQKGFIERTPRGRKATPYAFEHFSKKNEKRE
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atggacgatagaatggtagatcaatctatacatgatgaggaatcttcatttgaattttca
ttgcgaccgactaaattacgtcagtacataggtcaatcaacgattaaatcgaatttagag
gtgtttataaaagcagctaaaattagacaagaaccattagaccatgtgctgttattcgga
ccccctggattaggtaaaacgacattgtccaatattattgcaaatgaaatggatgttaac
attagaacgatttctgggccttcaatagaaaggcctggagatttagctgcaattctgtct
agtttacaacctggtgatgttttatttatagatgaaattcatagactaagtagtgttgta
gaagaagttttgtacccagctatggaagatttcttccttgatatcgttataggcaagggt
gaagaagcacgtagtatacgtatagatctaccgccattcacattgattggcgcgacgaca
cgtgcaggtagtttgacagccccattgcgtgacagattcggtgtgcatctcagattagaa
tattacaaagaacatgaattaaaagaaattattgtgcgtacagcagaagtacttggtacc
tcaattgatgacgatagcgctatagaattagcaaaacgtagtcgtggtacgccaagggta
gccaatagattattaaaacgggttcgtgattttcaacaagtcaatgatgatgagtcaatc
tgtattgaaaccacgaaagcatcattgcaattactccaagttgatgatgaaggattagac
tacatagatcataaaatgatgaattgtattttggagcaatataaaggtggacctgttggg
ttagatacaattgctgtttcgattggtgaagagcggattacaattgaagatgtgtatgaa
ccttttttaattcagaagggttttatcgaacgcacaccccgtggtcgtaaagcaacacct
tatgcatttgaacattttagtaagaagaatgaaaagagggaataa
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