Staphylococcus xylosus C2a: SXYL_01241
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Entry
SXYL_01241 CDS
T03742
Name
(GenBank) ATP-dependent exonuclease V alpha subunit
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
sxo
Staphylococcus xylosus C2a
Pathway
sxo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sxo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
SXYL_01241
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sxo03400
]
SXYL_01241
Enzymes [BR:
sxo01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
SXYL_01241
DNA repair and recombination proteins [BR:
sxo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
SXYL_01241
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_30
AAA_19
HHH_RecD2
OB_YrrC
SH3_13
UvrD_C_2
AAA_11
Viral_helicase1
AAA_22
HHH_5
AAA_12
nSTAND3
AAA
Zeta_toxin
AAA_14
NPHP3_N
AAA_16
TsaE
Rad17
T2SSE
AAA_28
Mg_chelatase
UvrD-helicase
NB-ARC
ABC_tran
DUF815
AAA_29
SLFN-g3_helicase
AAA_18
AAA_17
DUF3297
NTPase_1
UvrD_C
Motif
Other DBs
NCBI-ProteinID:
CEF18625
LinkDB
All DBs
Position
Chr1:1290544..1292931
Genome browser
AA seq
795 aa
AA seq
DB search
MENPTLFNNSMIKGTVDAILFQNKENFYTVLKVDTIESNETFDSMPTIVGFFPDIAEGDV
YTFKGQVVTHAKYGKQLKAETFEKELPQTKEAIISYLSSDLFKGIGKKTAQSIVNKLGEN
AISDILNDPTILEKVPSLPKKKQKQIAEQIASNQETEQIIIRLHDLGFGPKLAMAIYQAY
LGETLNVVEKKPYQLVYDVKGIGFNKADTLARNVGIQFNDAERLKAGLLYVLEEECIKQG
HTYLPTNNVLEMTQDMLSQPPGELIETQQLEQVLQDLVNDTKLIQQENEVAIPSLYYSEL
KSVQNLYRNFSYTNKLKEIEQSDLLLEIGEIEERNKVTYADSQREALQTAINSKIMLLTG
GPGTGKTTVIKGIVELYAELHGLSLDYDDYQNDDYPVVLGAPTGRASKRLSESTGLEAMT
IHRLIGWNQDTQPEDILDNEISAKLIIIDEMSMVDTWLFHQFLSAVPIDAQVILVGDEDQ
LPSVGPGQVFKDLIDSKVIPRVNLTEVYRQQDGSSIIELAHRMKLGETIDITQRFHDRNF
INCTTEQIPSVVEKVVSSAVNKGYDMSDIQVLAPMYKGSAGIKKLNTVLQDILNPKEQDT
REIEFGDIVFRKGDKVLQLVNRPSDNIFNGDIGVIVGIFWAKENALNKDVLVVDFEGNEI
TFVRQDLMELTHAYCTSIHKSQGSEFPIVIMPMVKQYFRMLQKPILYTGLTRAKQSLVFL
GDPQAFDIGLKTHGQVRMTQLCAFLKAYFNNEEETETADVSKSFDSDIILSEENIFKINP
MINMGEFSPYDFVED
NT seq
2388 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaccctacactatttaacaattcaatgattaaagggaccgttgatgcgatttta
tttcaaaacaaagagaatttttatacggttttaaaagttgatacgattgaatccaatgag
acatttgattcaatgcctacaattgtagggtttttcccagatattgcagaaggtgacgtc
tatacatttaaaggccaagtagttacacatgcaaaatatggcaaacaattaaaggctgaa
acatttgaaaaagagttaccacaaacgaaagaagcaattataagttatttatctagtgat
ctttttaaaggaataggtaaaaaaacagctcaaagtattgtaaataaattaggtgaaaat
gcaattagcgacatattaaatgatccaactatattagaaaaagtacctagtttacctaaa
aagaaacaaaaacaaattgctgaacaaatcgcaagtaatcaagaaacggaacaaataatc
attcgcctccatgatctaggttttgggccaaagttagcaatggctatataccaagcatat
ttaggagaaacacttaacgtagttgaaaagaaaccttatcaacttgtatatgatgtcaaa
ggcatcggttttaataaggcagacacattagcgcgtaatgtcggcattcaatttaacgat
gcagaacgtcttaaagcagggttactttatgtgttagaagaagaatgtataaaacaaggt
catacgtatttacctacgaataatgtactagagatgactcaagatatgctatcacaacca
ccaggtgaactaatagaaacacagcagcttgaacaagttttacaagatttagttaatgac
actaaattaattcaacaagaaaatgaagttgcgattccaagtctatactattcagaattg
aaaagcgttcaaaatttataccgtaatttttcttatacaaataaactaaaagaaattgag
caatctgatttgctgcttgaaataggagaaattgaggaacgcaataaagtgacatatgca
gattctcaaagagaagccttgcaaacagcgattaactctaaaataatgttactgactggt
ggcccaggtacaggaaaaacgactgtcattaaaggaattgttgaactttatgcagagttg
catggtctatcattagattatgacgattatcaaaatgatgattatccagtagttctaggt
gcgccaactggacgtgcatcgaaacgtttgtcagagtcaactggtttagaagctatgacg
atacatcgcttaataggttggaatcaagatacacaaccagaagatattttagataatgaa
atttctgcaaaacttattattattgatgaaatgtctatggttgatacatggttattccat
caatttttgagtgctgtacctattgatgcacaagttatactagtcggtgatgaagatcag
ctgccatctgttggaccaggccaagtatttaaagatttaattgattcaaaagtaattcct
cgtgtaaatttaactgaagtttaccgacaacaagatggttcaagtattatagaattagcg
cataggatgaaactaggagaaactattgatattacacagagatttcatgaccgtaatttt
ataaactgtacaacagaacagataccttcagttgttgaaaaagtggtgtcaagtgcagtg
aataaaggttatgatatgagtgatattcaagtattagctccgatgtataaagggtctgca
ggtattaagaaactaaatacagtattgcaagatatcttgaatcccaaagaacaagatact
agagaaattgagttcggtgatattgtctttagaaaaggtgataaggtattacaactagtt
aaccgaccaagcgataatatatttaatggtgatatcggggtcattgtaggcatcttctgg
gctaaagaaaatgcattaaacaaagatgtattggtagttgattttgaaggtaatgagatt
acatttgttcgtcaagacttaatggagttgacgcatgcctattgtacttcaatccataag
tcacaaggatcagaatttccgatcgtgattatgccaatggttaaacagtactttagaatg
cttcaaaaacctatattatatacaggtttaacacgtgctaaacagtcacttgtgttctta
ggagatccacaagcatttgatattggtctaaagactcacggccaagtgagaatgacacaa
ttgtgtgcttttcttaaagcgtattttaataatgaggaagaaactgaaactgctgatgtc
agtaaatcctttgattcagatattatattgtctgaagaaaatatatttaaaataaatcca
atgattaatatgggtgaattttccccgtatgacttcgttgaagattga
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