Staphylococcus xylosus C2a: SXYL_01298
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Entry
SXYL_01298 CDS
T03742
Name
(GenBank) ATP-dependent RNA helicase
KO
K18692
ATP-dependent RNA helicase CshB [EC:
5.6.2.7
]
Organism
sxo
Staphylococcus xylosus C2a
Brite
KEGG Orthology (KO) [BR:
sxo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sxo03019
]
SXYL_01298
03009 Ribosome biogenesis [BR:
sxo03009
]
SXYL_01298
Enzymes [BR:
sxo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
SXYL_01298
Messenger RNA biogenesis [BR:
sxo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
SXYL_01298
Ribosome biogenesis [BR:
sxo03009
]
Prokaryotic type
rRNA helicases
SXYL_01298
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
CEF18682
UniProt:
A0A5R9B5N6
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All DBs
Position
Chr1:1346147..1347487
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AA seq
446 aa
AA seq
DB search
MANHPFEKFNLEPSLIDAVKDLNFDQPTEIQSRVIPKIIKQVNLIGQSQTGTGKSHAFLL
PLINSIDTEYKEPQAIVVAPTRELAQQLFDVASHITKFKEDVSVKLFIGGTDIEKDRSRA
KNQPQLVIGTPTRINDLAKHGDLHVHLASYLVIDEADLMIDLGLMDEVDYVATRLDEKAH
IAVFSATIPKSLHPFLNKYLENPDFVEIENTEKNKKNIEFYLIPTKGEAKIEKTLKLMDI
LNPYLCIIFCNSRDSADELAKQLNAAGLKVGMIHGGLSPRERKQQMKRIRNLEFQYVIAS
DLASRGIDIDGVSHVINFDVPNDIDFFTHRVGRTGRGQYKGVAITLYSPDEENNVALIEQ
RGYHFENVDIKDDELKAIKAHNLRQSRKNKDDHLTNQLKYKVKSNKKKVKPGYKKKFKRD
LDDLKRKERKQFSKQQSRQERKNRKG
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atggcaaatcacccatttgagaaatttaatttagaaccaagtctgattgatgctgtgaaa
gatttgaattttgatcaaccgactgaaattcaaagccgagtaataccaaaaataataaaa
caagtaaacttaatcggccaatcacaaacagggacaggtaaatcccacgcatttttatta
ccgttaatcaattcaatagatacagagtataaagaaccacaagcaattgttgtagctcct
acaagagaattagcacaacaactttttgatgttgctagccatataacaaaatttaaagaa
gacgtgtcagtcaaattattcataggtggcacagatattgaaaaagatcgtagtcgtgca
aagaatcaaccacaacttgtcataggtacacctacacgtattaatgatttagctaaacac
ggggatttacatgtacacttagcatcctatttagtcattgatgaagcagacttaatgata
gatttaggactaatggatgaagtagattacgttgctacaagattagatgagaaagcgcat
attgcagtgttcagtgctacgataccaaaatcgttacatccatttttaaataaatatctt
gaaaatcctgattttgtagaaattgaaaatacagaaaagaacaaaaagaatattgaattc
tatttaattccaacaaaaggcgaagctaaaatagaaaagaccttaaaattaatggatata
ctaaacccttatttatgtatcattttctgtaatagcagagacagtgccgatgaattagct
aaacaactcaatgctgctggtttgaaagtaggcatgattcatggtggtctttcacctaga
gaacgtaagcaacaaatgaaacgtattagaaatttagaatttcaatacgtaatagctagt
gatttagcatcacgtggtatcgatatcgatggtgtaagtcatgtgattaactttgatgtg
ccaaatgatattgatttctttacacaccgcgtaggacgtactggtagaggacaatataaa
ggcgttgcaataactttatatagccctgatgaagaaaataatgttgcattaattgaacaa
cgtggctatcattttgaaaacgtagatattaaagacgatgagttaaaggccattaaagct
cataatttacgtcaatcacgtaaaaataaagatgatcatttaacaaatcaattaaaatat
aaagttaaaagcaataagaaaaaagtcaaacctggttataagaaaaaattcaaacgtgat
ttggatgatttaaaacgtaaagagcgtaaacaattcagcaaacaacagagtagacaggaa
agaaaaaatagaaaaggatag
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