Staphylococcus xylosus C2a: SXYL_01954
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Entry
SXYL_01954 CDS
T03742
Symbol
addA
Name
(GenBank) ATP-dependent helicase/nuclease subunit A
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
sxo
Staphylococcus xylosus C2a
Brite
KEGG Orthology (KO) [BR:
sxo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sxo03400
]
SXYL_01954 (addA)
Enzymes [BR:
sxo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SXYL_01954 (addA)
DNA repair and recombination proteins [BR:
sxo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
SXYL_01954 (addA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
DEAD
AAA_12
ResIII
Motif
Other DBs
NCBI-ProteinID:
CEF19335
UniProt:
A0AAQ0LZK1
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All DBs
Position
Chr1:complement(2006121..2009777)
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AA seq
1218 aa
AA seq
DB search
MSQIPVKPGNTRWTDNQWKSIYAKGQDILVAAAAGSGKTAVLVERIIQRIIKDEIDVDKL
LVVTFTNASAREMKHRVDQRIQEASNEDPNNTHLKNQRVKIHQAQISTLHSFCLKLIQHH
YDVLDIDPNFRTSSEAENILLLEQTIDEVLEKHYDQLDPNFIDLTEQLSSDRNDNQLRNT
VKEMFYFSVANPNPTAWLNQLSAPYDDVTKQADLLKLLNDLAMIFMNSALEALNKSYDLF
MMLEEVDKQVEVLEKERRFIAQAMEGGTLNTQVIAEHQFEARFPAKNKKIKEANEMMLDA
YDDGKKHYDQYKALVTKVQEDYFSRNAEDLKIDMQRLAPRVAYLAQVTEDVIELFNQKKR
SRNLLDFSDYEHFALRVLMNEDGTPSDIADMYCEQFEEILVDEYQDTNRVQEQIIACIKR
GNEADGNLFMVGDVKQSIYKFRQADPSLFIGKYNRFTLDGSENGMRIDLSQNFRSRKEVL
TTTNYLFKHMMDEAVGEIVYDDAAQLYYGAPYDNEPHNVQLNMLVEDASSDLNGSEQEAE
YIVQQVEKIMSEHEIYDMTTEQYRKPSYKDIVILERSYGQARKIQQAFKDHNIPFHVNSK
EGYFEQTEVQLILSFLRTVDNPLQDIYLVGLMRSVIYQFTEDELSNIRVFSPNDDYFYQS
IQHYIANDAANKKLVAKLESFLKDIEMYQHYSQSHPVYQLIDKFYNDHYVIQYFSGIIGG
KGRRANLYGLFNKAVEFENSSFRGLYQFIRFIDELIERGKDFGEENIVGPNDDVVRMMTI
HSSKGLEFPFVIYSGLSRRFRRDDLHRPVILNQSYGLGMTYYDVDSRLSYPSLSSVTYKA
IAEKEMVSEEMRLIYVALTRAKEQLFLIGRVKDEKELTQFEQVSVSQTHLPVSYRLTAQR
PIDMIYSILAKYQSTSLPKELRFEATINDIDDSMKPFVQLKTDFYEDIASEIVIAESEQR
TLVDIQSAQTNNDELKAQIHKQLSFKYPHQVAIEKPSKQSVSELKRQLETEQADTNYDRV
RQYRIGSASYDRPGFLSHTTKRKANEIGTLMHTVMQHLPFKKEGLSRSDVDVLINQLIDK
HIIDEDAKKDVRFEDIYQFIESELYSTIAMSERIYRELPFVVNQAKVDRIENMEEDASII
QGMIDLIFEKDGQYYFVDYKTDAFNRRRNMSDEAIGAQLRERYKVQMEYYRNTLETILKT
NVKGYLYFFKFGQLSIDE
NT seq
3657 nt
NT seq
+upstream
nt +downstream
nt
atgagtcaaataccagtgaaacctgggaatacgagatggacagataaccaatggaagagt
atttatgcaaaaggtcaggatatacttgttgcggctgccgcaggttctggtaaaactgcc
gtattggttgagcgcattatacaacgtattattaaagatgaaattgatgtggataaactg
cttgttgttacatttacgaatgcaagtgcgagagaaatgaaacaccgtgtagaccaaaga
attcaagaagcttcaaatgaagatccaaacaatacacatttaaagaatcagcgtgtgaag
atacatcaagcacaaatatctacgttacatagtttttgtttgaaattaattcaacaccac
tatgatgtgctagatattgatcctaactttagaacaagtagcgaagctgaaaatatactg
ctacttgaacagacaatagatgaagtgttagaaaaacattacgaccaacttgatcctaat
ttcattgatctaactgaacaattatcttctgatcgtaatgataatcaactgcgtaacact
gttaaagaaatgttttattttagtgtggcaaatccaaatccaactgcatggttgaatcag
ctatcagcaccatatgatgatgttacaaagcaagcagatttattaaaattattaaatgat
ttagctatgatttttatgaattctgcattggaagcgctgaataaaagttatgatttattc
atgatgcttgaagaagtagataaacaagttgaagtgttagaaaaagagcgtcgttttatt
gctcaagcaatggaaggtggtactttaaacacacaagttattgcagaacaccagtttgaa
gcacgttttccagctaagaataaaaaaataaaagaagccaatgaaatgatgttagatgca
tacgatgatggtaaaaaacactacgatcaatacaaagcattggtaactaaggtacaagaa
gattatttttcacgtaatgctgaagatttaaaaatagatatgcagcgcttagcgcctaga
gtagcatatttagcacaagtaacagaggatgtaattgaactatttaatcagaagaagcgt
agtagaaacctacttgatttttcagattatgaacattttgcattgcgcgtattgatgaac
gaagatggtacaccatcagatattgctgatatgtattgtgaacagtttgaagaaatactt
gtcgatgaataccaagataccaaccgtgtacaagagcaaattattgcatgtattaaacgg
ggtaacgaggcagatggaaatttatttatggtaggtgacgttaaacaatctatttataaa
tttaggcaagcagatcctagtttatttatagggaagtataaccgttttacattagatggt
tcagagaatggtatgcgtattgatttatcgcaaaatttccgttctagaaaagaagttttg
actacaacgaactatttatttaagcatatgatggatgaagcggttggagaaatcgtctat
gacgatgctgcccaactttattatggtgcgccttacgataatgagccacataatgtccag
ttgaacatgttagttgaagatgcttcttcggacttaaatggttcggaacaagaagcagaa
tatattgttcaacaagtggaaaagattatgtcagaacatgaaatttatgatatgacaact
gagcagtatcgtaaaccaagttataaagatattgtcattttagaacgttcttatggccag
gcacgcaagatacaacaagcgtttaaagatcataacattccctttcatgtaaatagtaaa
gagggatactttgaacagactgaagttcaactcatattatctttcttaagaacagtagat
aatcctttacaagatatttatttagttgggcttatgcgttctgtaatttatcaatttact
gaggatgagttatcaaatatcagagtatttagtccaaatgatgattatttttatcaatcg
atacagcactatatagctaatgacgctgctaataaaaaattagtcgctaaactcgaatca
ttcttgaaagatattgaaatgtatcaacactatagccaaagtcatcctgtctatcaatta
attgataagttttataatgaccattatgttattcaatattttagtggcatcattggtggt
aagggtagacgtgcaaatttatacggactgttcaataaagcagtagaatttgaaaattct
agtttccgtggattataccaatttattcgttttatagatgaattgatcgaacgaggtaaa
gattttggtgaagaaaatattgtcggaccaaatgatgatgttgtgcgaatgatgacgatt
catagtagtaaagggttagaattcccattcgtcatttactctggattatcaagacgtttt
agaagagatgatttacacaggccagtaatcttaaatcaaagctatggtttaggtatgacc
tattatgacgttgatagtcgcttgtcttatccatcgttatcctcggttacgtataaagcg
atagccgaaaaagaaatggtatcagaagaaatgaggctaatctatgttgcattgacacgt
gctaaagaacaattgtttttaattggacgcgtaaaagacgaaaaagaattaacgcaattt
gaacaggtttcagtgtcgcagacgcatttacccgtgagttatcgtttaaccgcgcaacga
ccaattgatatgatttattcaatattggctaaatatcaatctacatcactgccaaaagaa
ttacggtttgaagcaacaatcaatgacattgatgactcaatgaagccttttgtacagttg
aaaacagacttctatgaagatatagcatcagaaatcgttatagctgaaagtgaacaacgt
acgttagtagatatacagtctgctcagactaataatgatgagcttaaggcgcagattcat
aaacaattaagtttcaaatacccacatcaagtagcgattgaaaagccatcaaaacaatcc
gtatcagaactgaaacgacaacttgaaacagaacaagctgacactaactacgatagagtt
agacaataccgaattggctcagcctcatatgatagaccaggatttttaagccatactacg
aaacgaaaagcaaatgaaattggtacgcttatgcatacggtaatgcaacatttaccgttt
aaaaaagaagggctgtctcgtagtgatgtggatgtacttatcaatcagttaatagacaag
catattattgacgaagatgctaaaaaggatgtccgatttgaagatatttatcagtttatt
gaaagtgaattatattcaacgattgctatgagtgaacgtatatatcgtgagttaccattt
gtcgtcaatcaagctaaagtagaccgtattgaaaatatggaagaagatgcttctattata
caaggtatgattgaccttatatttgagaaggatggccaatattactttgtcgattataag
acagatgcctttaatagacgtcgcaatatgtcagacgaagcaataggtgcacagctaaga
gaacgctataaggtgcaaatggaatactatcgaaacactttagaaactatactgaaaaca
aatgttaaaggctatttatatttctttaaatttggacaactttctattgatgaataa
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