Staphylococcus xylosus C2a: SXYL_02088
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Entry
SXYL_02088 CDS
T03742
Symbol
uvrA
Name
(GenBank) UvrABC system protein A
KO
K03701
excinuclease ABC subunit A
Organism
sxo
Staphylococcus xylosus C2a
Pathway
sxo03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
sxo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
SXYL_02088 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sxo03400
]
SXYL_02088 (uvrA)
DNA repair and recombination proteins [BR:
sxo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
SXYL_02088 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
SXYL_02088 (uvrA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
AAA_21
AAA_29
RsgA_GTPase
AAA_33
AAA_16
nSTAND1
AAA_22
DnaJ_CXXCXGXG
nSTAND3
AAA_23
AAA_14
ATPase_2
Viral_helicase1
ATPase
cobW
NACHT
SLFN-g3_helicase
FtsK_SpoIIIE
TBPIP_C
Motif
Other DBs
NCBI-ProteinID:
CEF19468
LinkDB
All DBs
Position
Chr1:complement(2126204..2129047)
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AA seq
947 aa
AA seq
DB search
MTQMKQPSIVVKGARAHNLKDVDIEIPKDKLIVMTGLSGSGKSSLAFDTIYAEGQRRYVE
SLSAYARQFLGQMDKPDVDTIEGLSPAISIDQKTTSKNPRSTVATVTEIYDYIRLLYARI
GRPFCPNHGIEIESQTVQQMVDQVMKLEERTKIQILAPVITHRKGAHEKLIDDISKKGYV
RVRVDGEITDVNEVPALDKNKNHTIEVVIDRLVVKEDIEARLADSIETALQLSEGSLIVD
IIDGEELKFSENHACPICGFSIGELEPRMFSFNSPFGACPTCDGLGQKLTVDLDLVVPDA
DKTLNEGAIVAWESSSSDYYPTLLNRVCEVFKINMDKPFKKLTDRQKDIILYGSKGKEIE
FTFTQRNGQTRKRTMEFEGVINNINRRYHDSPSELVREMMSKYMTELPCETCHGKRLSRE
ALSVYIAGHNIGDVVEQSIKEALHSYEHIELSEQDRKIANQILKEINSRLEFLYNVGLEY
LTLNRASGSLSGGEAQRIRLATQIGSRLSGVLYVLDEPSIGLHQRDNDRLINTLKEMRDL
GNTLIVVEHDDDTMRAADFLVDVGPGAGEHGGEIVASGTPKQVMNNKKSLTGQYLSGQKR
IEVPEARRQVTDRKISVKGARSNNLKGIDVDFPLSTMTVVTGVSGSGKSTLVNEVLYKSL
AKHINKSKIKPGDYDEIQGIDQLDRIIDIDQSPIGRTPRSNPATYTGVFDNIRDIFAQTN
EAKVRGYTKGRFSFNVKGGRCEACKGDGIIKIEMHFLPDVYVPCEVCGGSRYNRETLEVT
YKGKNIADILAMTAEEATMFFENVPKIHRKLKTLVDVGLGYVTLGQPATTLSGGEAQRVK
LASELHKRSTGRSIYILDEPTTGLHVDDISRLLKVLNKLVENGDTVVIIEHNLDVIKMAD
HIIDLGPEGGDGGGTLVATGTPEAITEVEESYTGRYLKPVLARDTVK
NT seq
2844 nt
NT seq
+upstream
nt +downstream
nt
gtgacacaaatgaaacaaccatccattgtagtaaaaggggcacgtgcccataatttaaaa
gatgttgatatagaaatacctaaagataaacttatagttatgactggactttcaggttca
ggtaaatcatctttagcatttgatacaatatatgccgaaggacagcgtagatatgttgaa
tcattaagtgcatatgcaagacaatttttaggtcaaatggataaaccagacgtagacacg
atagaaggcttatctccagctatttcaatagatcaaaaaacgacgagtaaaaatccaaga
tctactgttgcaaccgtaacagaaatttatgattatataagattactctatgcgcgtata
ggaagaccattctgccctaatcatggcattgaaatagaatcacaaacagtacaacaaatg
gttgatcaagtcatgaaattagaggaacgtactaagattcaaattctcgcgccagtgatt
acacatagaaaaggtgctcatgagaaattaattgatgacattagtaaaaaaggttatgtg
cgtgtcagagtagatggtgaaataactgatgtaaatgaagtacctgcattagataaaaat
aaaaaccacactattgaagtagtcattgaccgtttagtagttaaagaagacattgaagca
cgtttggcagactctatcgaaacagcgttgcaactttctgaaggtagtctcattgtagat
attattgacggcgaagaattaaaattctcagaaaatcatgcttgtcctatttgtggtttc
tcaattggcgaattagaaccacgtatgtttagttttaacagtccatttggcgcttgccca
acttgtgatggcttaggccaaaaacttactgttgatttagatttagtagttcctgatgct
gataaaacgttaaacgaaggtgctattgttgcttgggaatcatctagttctgattattat
ccaactttgttaaaccgtgtttgtgaagtgtttaaaataaatatggacaaaccatttaaa
aagcttacagatcgacaaaaagatatcattttatatggttcaaaaggtaaagaaattgaa
tttacattcacacaacgcaatggccaaactcgcaaacgtacaatggagtttgaaggtgta
atcaataatataaatagaagatatcatgattcaccatctgaattggtaagagaaatgatg
agtaaatacatgactgaattgccatgtgaaacttgtcacggtaaacgtttaagtcgtgaa
gcgctatctgtttatattgcaggacataacattggtgatgtcgttgaacaatctattaag
gaagcgttgcatagctatgaacatatagaattatctgaacaagatagaaaaattgcgaac
caaatcttaaaagaaatcaattcaaggttagaattcttatataatgttggactagagtat
ttaacattgaatcgcgcgtctggttcgctatctggtggtgaggcacaacgtattcgactt
gcgacacagattggttcaagactttcaggtgtgctttatgtcttagatgaaccttctatc
gggttacatcaacgagacaatgaccggttaattaatacgttaaaagaaatgcgtgattta
ggcaatactttaattgttgttgaacatgatgatgatacaatgcgcgcagcagacttctta
gttgatgttggtccaggggccggcgaacatggtggagaaattgttgcgagtggaacaccg
aaacaggtaatgaataataagaaatcattaacaggccaatatttaagtggtcaaaaacgt
attgaagtacctgaagcgcgtagacaggttacagatcgcaaaattagtgtgaaaggtgcg
agaagtaataacttgaaaggtatagatgttgattttccactttcaacaatgactgtggtc
acaggcgtttcgggttctggtaaaagtacattagtgaatgaggtgctttacaaatcatta
gcaaaacatatcaacaaatcaaaaataaaacctggtgattacgatgaaattcaaggcata
gatcaattagatcgtatcattgacattgaccaatctccaattggccgaacgccaagatct
aatccagctacttacacaggggtttttgataatattcgagatatctttgcacagactaat
gaagcgaaagttagaggttatacgaaaggtcgttttagtttcaatgttaaaggcggtcgt
tgtgaagcgtgtaaaggcgacggtattataaaaatagagatgcatttcttacctgatgtg
tatgtaccttgtgaagtgtgtggtggttctagatataaccgtgaaacactagaagtgaca
tacaaaggaaaaaatattgccgatattttagccatgactgctgaagaagctacgatgttc
tttgaaaatgtacctaaaattcatcgtaaattgaaaacgttagtagatgttggtttaggt
tatgtaactttaggccagcctgctacaactttatcgggtggtgaagcgcagcgtgttaaa
cttgcttcagaattgcataaacgatctacaggtcgatcaatctatatattagatgaaccc
acaactggtttacatgtggacgatataagtcgtttgttaaaagtgttaaacaaacttgta
gagaatggtgacactgtagttattattgaacataatctagatgtgattaaaatggctgac
catatcatagacttaggacctgaaggtggcgatggtggtggtacactcgttgctactggt
acgcctgaagcaattacagaagttgaagaaagttatacaggtcgatatttaaaaccagta
ttagcacgtgatacggttaaataa
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