Staphylococcus xylosus C2a: SXYL_02402
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Entry
SXYL_02402 CDS
T03742
Symbol
pdxS
Name
(GenBank) Pyridoxal biosynthesis lyase PdxS
KO
K06215
pyridoxal 5'-phosphate synthase pdxS subunit [EC:
4.3.3.6
]
Organism
sxo
Staphylococcus xylosus C2a
Pathway
sxo00750
Vitamin B6 metabolism
sxo01100
Metabolic pathways
sxo01240
Biosynthesis of cofactors
Module
sxo_M00916
Pyridoxal phosphate biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P
Brite
KEGG Orthology (KO) [BR:
sxo00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00750 Vitamin B6 metabolism
SXYL_02402 (pdxS)
Enzymes [BR:
sxo01000
]
4. Lyases
4.3 Carbon-nitrogen lyases
4.3.3 Amine-lyases
4.3.3.6 pyridoxal 5'-phosphate synthase (glutamine hydrolysing)
SXYL_02402 (pdxS)
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Gene cluster
GFIT
Motif
Pfam:
SOR_SNZ
ThiG
His_biosynth
Dus
NMO
NanE
FMN_dh
IGPS
TMP-TENI
IMPDH
TetR_C_27
DUF561
OMPdecase
TIM
Motif
Other DBs
NCBI-ProteinID:
CEF19782
LinkDB
All DBs
Position
Chr1:complement(2446135..2447022)
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AA seq
295 aa
AA seq
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MSKVTGSERVKRGMAEMQKGGVIMDVVNAEQAKIAEEAGAVAVMALERVPSDIRAAGGIA
RMANPKIVEEVMNAVSIPVMAKGRIGHITEARVLESMGVDYIDESEVLTPADEEYHLLKD
TFTVPFVCGCRNLGEAARRIGEGAAMLRTKGEPGTGNIVEAVRHMRQVNAEVKRLTVMND
DEIMTEAKNIGAPFEVLKNIKENGKLPVVNFAAGGVATPQDAALMMELGADGVFVGSGIF
KSEDPEKFAKAIVQATTHYQDYELIGRLAKDLGTAMKGLDINELTLEERMQERGW
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
atgtctaaagtaactggatcagagagagttaaaagaggaatggcagaaatgcaaaaaggc
ggcgtgattatggacgttgtcaatgctgagcaagctaaaatagcagaggaagctggagca
gttgcagtaatggctctagaacgtgtaccttctgatattagagcagctggtggcattgct
cgtatggctaatcctaaaattgtagaagaagttatgaacgctgtttcgattccggtaatg
gcaaaaggacgtatcggtcatattactgaagcgcgtgtacttgaatcaatgggcgtagac
tatattgatgaatcagaggtattaacacctgcagatgaagaatatcatctattaaaagat
acgtttacagtaccatttgtatgtggttgccgtaacttaggtgaagctgcaagacgtatc
ggtgaaggtgcagcaatgctacgtacaaaaggtgagccgggtacaggaaatattgtagaa
gctgttagacacatgcgtcaagttaatgcagaagtaaaaagattaacagtgatgaatgat
gacgaaattatgactgaagctaaaaatattggagcaccgtttgaagtgctaaaaaatatt
aaagagaatggtaaacttcctgttgttaactttgcagctggtggtgtagctacacctcaa
gatgcagcattaatgatggaattaggtgctgatggtgtattcgtaggctctggtattttt
aaatcagaagaccctgaaaaattcgctaaagctattgtgcaagctacaactcattaccaa
gactatgaattaattgggcgtttagcaaaagatttaggtacagctatgaaaggtttagac
atcaatgaattaactttagaagaacgtatgcaagagcgtggatggtaa
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